Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 RNA5SP151-201ENST00000365632 117 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 HLFP1-201ENST00000402375 499 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AL353692.2-201ENST00000407054 335 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 SMC4P1-201ENST00000414479 527 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 RPEP2-201ENST00000432149 701 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AC006445.1-201ENST00000491925 405 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 RNA5SP480-201ENST00000516840 109 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AC007546.2-201ENST00000623996 360 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 RNU6-482P-201ENST00000391068 107 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 AC005868.1-201ENST00000536421 331 ntBASIC1.55□□□□□ -2.16
MACF1Q9UPN3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
MACF1Q9UPN3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 CEACAMP1-201ENST00000434624 1035 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL356535.1-201ENST00000440335 398 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MTND1P6-201ENST00000523621 946 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC015712.3-201ENST00000559380 164 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SNX6P1-201ENST00000601728 1224 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC064801.1-201ENST00000612025 407 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 OR51C1P-202ENST00000641159 1444 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL355488.2-201ENST00000609909 2850 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AP002001.2-201ENST00000529025 1469 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC006028.1-201ENST00000438379 402 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RPL31P41-201ENST00000477967 372 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC124856.1-201ENST00000600819 896 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MIR432-201ENST00000606207 94 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 5S_rRNA.16-201ENST00000612928 119 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RN7SKP185-201ENST00000362813 326 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PCNPP4-201ENST00000414817 517 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC011742.2-201ENST00000443818 352 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC245060.6-201ENST00000624350 8420 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RNA5SP508-201ENST00000411327 119 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 NUP35P1-201ENST00000422734 947 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC108022.1-201ENST00000493466 478 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 STX3-204ENST00000530221 534 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL352979.3-201ENST00000553515 247 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC025627.2-201ENST00000576220 160 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC091178.1-203ENST00000584586 279 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms