Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
UBQLN1Q9UMX0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.23□□□□□ -1.73
UBQLN1Q9UMX0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBQLN1Q9UMX0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
UBQLN1Q9UMX0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 OR5T3-201ENST00000303059 1023 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 TRIM60P13-201ENST00000432350 1283 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 Z99127.2-201ENST00000441426 334 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 VN1R25P-201ENST00000443385 738 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 RANP8-201ENST00000444720 713 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 VN1R40P-201ENST00000455196 941 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 CYCSP53-201ENST00000455540 265 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 NPM1P47-201ENST00000560843 856 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC006130.2-201ENST00000586202 326 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AP000255.1-201ENST00000610276 676 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC026368.1-201ENST00000614934 690 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AL591424.2-201ENST00000617023 128 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 FP236240.3-201ENST00000623061 327 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AF001550.2-201ENST00000636643 217 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC119674.1-220ENST00000641502 1048 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC006042.3-201ENST00000454684 1469 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC097504.1-201ENST00000515103 2415 ntBASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBQLN1Q9UMX0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.21□□□□□ -1.73
UBQLN1Q9UMX0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.21□□□□□ -1.73
UBQLN1Q9UMX0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
UBQLN1Q9UMX0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.21□□□□□ -1.73
UBQLN1Q9UMX0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.21□□□□□ -1.73
UBQLN1Q9UMX0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 RNU6-1251P-201ENST00000364502 107 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 ZNF602P-201ENST00000405929 924 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 CYCSP19-201ENST00000411715 316 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AL450992.3-201ENST00000413192 568 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 MTCYBP7-201ENST00000419540 1134 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 ARL5AP3-201ENST00000439327 386 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 RRM2P4-201ENST00000441721 562 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 MTND2P3-201ENST00000452458 470 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 EIF2S2P4-201ENST00000461070 984 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 LARP7P4-201ENST00000481075 878 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 RN7SKP141-201ENST00000516167 338 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 MYL12AP1-201ENST00000518490 515 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 OR4A12P-201ENST00000530847 918 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC107982.3-201ENST00000584957 985 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 HMGB1P51-201ENST00000605166 638 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 LINC00901.1-201ENST00000617252 152 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC073530.2-201ENST00000623987 261 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC034229.5-201ENST00000624258 185 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 AC110792.3-201ENST00000595906 1614 ntBASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBQLN1Q9UMX0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 AL450326.2-201ENST00000421913 1962 ntBASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 RNA5SP52-201ENST00000362448 134 ntBASIC4.2□□□□□ -1.74
UBQLN1Q9UMX0 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms