Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TRAV11-201ENST00000539512 339 ntBASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 MIR3944-201ENST00000581277 108 ntBASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 CR392039.5-201ENST00000623201 510 ntBASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPC1L1Q9UHC9 AL356274.2-201ENST00000624379 3752 ntBASIC5.21□□□□□ -1.57
NPC1L1Q9UHC9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NPC1L1Q9UHC9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NPC1L1Q9UHC9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.21□□□□□ -1.57
NPC1L1Q9UHC9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.21□□□□□ -1.57
NPC1L1Q9UHC9 SOD2P1-201ENST00000396543 562 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 TCEA1P2-201ENST00000420496 906 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC087650.1-201ENST00000431445 468 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 GOT2P5-201ENST00000433995 546 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 RPL7L1P1-201ENST00000448259 785 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 SNORA62.6-201ENST00000606322 83 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC117490.2-201ENST00000610042 594 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC244100.1-202ENST00000621554 382 ntBASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.21□□□□□ -1.58
NPC1L1Q9UHC9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 U8.11-201ENST00000384699 133 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 U8.12-201ENST00000384701 133 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 MIR200C-201ENST00000384980 68 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CRYBB2P1-203ENST00000415709 538 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 NANOGP6-201ENST00000429190 847 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AL450263.2-201ENST00000439400 589 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 RPL6P5-201ENST00000445678 828 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AL500522.2-201ENST00000448562 343 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 U8.18-201ENST00000459285 133 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AL133162.1-201ENST00000463228 453 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 SEPT7P6-201ENST00000469999 1143 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC109635.6-201ENST00000525487 1113 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 OR4A12P-201ENST00000530847 918 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 HSPE1P5-201ENST00000561489 272 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AL356489.2-201ENST00000566968 3528 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 SNORD39.2-201ENST00000579995 76 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC026368.1-201ENST00000614934 690 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AL590410.1-201ENST00000617925 333 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 AC007342.9-201ENST00000623877 1385 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 ZNF962P-201ENST00000443465 3140 ntBASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPC1L1Q9UHC9 MTCO1P8-201ENST00000416914 1523 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 RNU4-23P-201ENST00000362839 140 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 MIR449B-201ENST00000384995 97 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 NPM1P34-201ENST00000428821 893 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 AL392003.1-201ENST00000434394 243 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 UBDP1-202ENST00000457888 382 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms