Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC092647.2-201ENST00000452998 253 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 MTND1P16-201ENST00000465177 898 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 RN7SKP147-201ENST00000517154 244 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC105185.1-201ENST00000518705 535 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 SLC2A13P1-201ENST00000531560 322 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 ZNF321P-202ENST00000550843 495 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC009962.1-201ENST00000567327 3813 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC145350.1-201ENST00000567426 208 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC069304.2-201ENST00000605154 435 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AL592221.1-201ENST00000605266 382 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AL158042.1-201ENST00000605338 460 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AP001521.1-201ENST00000609150 300 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC000123.2-201ENST00000623124 461 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC079416.3-201ENST00000624479 549 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC017037.3-201ENST00000625016 472 ntBASIC4.81□□□□□ -1.64
LRFN1Q9P244 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.81□□□□□ -1.64
LRFN1Q9P244 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRFN1Q9P244 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AP001029.2-203ENST00000589795 4910 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC083899.1-201ENST00000454465 3819 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL672167.1-205ENST00000641112 3080 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 RN7SKP185-201ENST00000362813 326 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RNU6-984P-201ENST00000363236 109 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RNU6-1226P-201ENST00000384317 107 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 ENSAP1-201ENST00000392855 326 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 ATP5F1P2-201ENST00000398143 760 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL049545.1-201ENST00000401856 572 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 NUDT19P3-201ENST00000404698 555 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 BTBD10P2-201ENST00000404779 676 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL450338.1-201ENST00000407987 512 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RNU6-757P-201ENST00000410334 100 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RNU2-28P-201ENST00000410457 189 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC073136.2-201ENST00000417282 849 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 COX6CP15-201ENST00000426313 211 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL161722.2-201ENST00000434731 981 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 SLC31A1P1-201ENST00000451221 567 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RPL12P26-201ENST00000452430 487 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RN7SL197P-201ENST00000466981 299 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC010301.1-201ENST00000473936 355 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 RPL7P38-201ENST00000488396 739 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC023424.1-201ENST00000496058 459 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 RNF138P1-201ENST00000502765 546 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 MTCYBP37-201ENST00000510642 1133 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 HMGN1P9-201ENST00000515212 298 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC022360.1-201ENST00000521058 340 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms