Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC027228.2-201ENST00000567141 2154 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AL391994.1-201ENST00000254724 282 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 Y_RNA.201-201ENST00000364052 96 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC016397.1-201ENST00000412463 242 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC019178.2-201ENST00000423595 505 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC093414.1-201ENST00000434712 514 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 RPS29P9-201ENST00000440360 171 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 MTND2P19-201ENST00000449129 1012 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 BX842559.2-201ENST00000451418 605 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 RAP1BP2-201ENST00000478270 544 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 KLRA1P-201ENST00000503499 986 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC006539.2-201ENST00000601729 572 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AL358072.1-201ENST00000604156 575 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC091488.1-201ENST00000604239 660 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC133552.5-201ENST00000604266 540 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 MIR6810-201ENST00000622701 70 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AP000346.3-201ENST00000622821 210 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AC073348.1-201ENST00000623002 331 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AP003072.4-201ENST00000624580 310 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 CR392039.4-201ENST00000624968 501 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 MAPK10-328ENST00000641553 4009 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VTA1Q9NP79 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC079741.1-201ENST00000321498 212 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
VTA1Q9NP79 SNORA70.6-201ENST00000383934 134 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 RNU6-398P-201ENST00000384143 109 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AL390316.1-201ENST00000406279 553 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AL139098.1-201ENST00000407291 389 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 TPT1P2-201ENST00000413105 503 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AL161449.1-201ENST00000414531 1199 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 VN1R108P-201ENST00000431580 830 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 RPS26P40-201ENST00000435209 294 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC073264.2-201ENST00000448886 166 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 RPL7P1-201ENST00000468161 747 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 MTND4LP3-201ENST00000468320 276 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 RPL7P9-201ENST00000468715 747 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC104689.1-201ENST00000473356 768 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 MTND3P7-201ENST00000474435 343 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 DPRXP4-201ENST00000578053 568 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AL512782.1-201ENST00000603093 364 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC131235.4-201ENST00000609288 620 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC007786.3-201ENST00000615154 596 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC116618.1-201ENST00000634617 774 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC025125.1-201ENST00000624743 1922 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms