Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CYCSP42-201ENST00000450823 238 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC104687.1-201ENST00000485829 412 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AF213884.1-201ENST00000488102 463 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC093840.1-201ENST00000511599 336 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 CDH12P4-201ENST00000517835 295 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 CDH12P3-201ENST00000517935 295 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 CDH12P1-201ENST00000518435 295 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC022655.2-201ENST00000577280 318 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC068790.4-201ENST00000602474 263 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC104785.1-201ENST00000603220 588 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC115621.1-201ENST00000604653 858 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AL121890.3-201ENST00000618494 516 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 RMST_9.1-201ENST00000619945 193 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 ERCC6-202ENST00000374127 1782 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 IQCB2P-201ENST00000401788 1633 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 RNA5SP513-201ENST00000364648 118 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 RNA5SP366-201ENST00000365454 123 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 MIR937-201ENST00000401271 86 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 PGBD4P8-201ENST00000412993 562 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC114814.2-201ENST00000419195 485 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 BTF3P10-201ENST00000433415 495 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 GSTA7P-201ENST00000438425 448 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC041039.1-201ENST00000485656 536 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC099522.1-202ENST00000514718 367 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC012414.2-201ENST00000559474 187 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC068790.5-201ENST00000602741 355 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC078899.5-201ENST00000612475 178 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC233309.1-201ENST00000619522 751 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 MIR4727-201ENST00000622232 55 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 MAPK10-253ENST00000641010 4072 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 DDX6P1-205ENST00000441966 1436 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 OR11H5P-202ENST00000641612 1325 ntBASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LRRC40Q9H9A6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 ZNF962P-201ENST00000443465 3140 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC004987.3-201ENST00000413879 771 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 MTCO3P4-201ENST00000419236 787 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 FO393419.3-201ENST00000428741 282 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 COX6B1P7-201ENST00000430845 235 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 EIF2S2P2-201ENST00000447161 982 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC018635.1-201ENST00000468292 1030 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 RPL23AP2-201ENST00000471227 466 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC108475.1-201ENST00000507880 950 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 CR383656.6-201ENST00000550518 394 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms