Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP000827.1-201ENST00000527814 258 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 OR4C2P-201ENST00000530855 1064 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 AC093014.1-201ENST00000548926 724 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 QTRT1P1-201ENST00000604344 1078 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 AC006065.6-201ENST00000625201 545 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 OR5AC4P-202ENST00000642086 985 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM4Q9C037 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM4Q9C037 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM4Q9C037 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM4Q9C037 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 RPS3AP25-201ENST00000411660 793 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC093578.1-201ENST00000415219 368 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 USP12PY-201ENST00000427677 1064 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC007389.2-201ENST00000434630 306 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 TPTE2P3-201ENST00000441562 1189 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 RPS3AP12-201ENST00000443616 753 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 YWHAQP9-201ENST00000445891 512 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 NDUFB4P9-201ENST00000511646 388 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 Z98200.1-201ENST00000607298 470 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC039056.2-201ENST00000622261 511 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 CR392039.5-201ENST00000623201 510 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 AC112484.5-201ENST00000624189 228 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM4Q9C037 AL139254.3-201ENST00000641097 674 ntBASIC4.16□□□□□ -1.74
TRIM4Q9C037 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM4Q9C037 AC107021.2-201ENST00000567714 2095 ntBASIC4.15□□□□□ -1.74
TRIM4Q9C037 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM4Q9C037 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM4Q9C037 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
TRIM4Q9C037 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.15□□□□□ -1.74
TRIM4Q9C037 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM4Q9C037 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM4Q9C037 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM4Q9C037 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM4Q9C037 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 SNRPFP1-201ENST00000414761 252 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AL445584.1-201ENST00000431451 330 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 USP9YP7-201ENST00000436723 430 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 AC114495.1-201ENST00000441274 436 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 RRM2P4-201ENST00000441721 562 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 USP9YP32-201ENST00000452432 430 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 VN1R105P-201ENST00000486595 910 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM4Q9C037 NPM1P41-201ENST00000512920 831 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 RN7SKP34-201ENST00000516142 244 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 SNORA74D-201ENST00000516404 141 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 AL158062.1-201ENST00000619632 745 ntBASIC4.15□□□□□ -1.75
TRIM4Q9C037 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM4Q9C037 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM4Q9C037 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM4Q9C037 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM4Q9C037 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM4Q9C037 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM4Q9C037 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM4Q9C037 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 RNU1-132P-201ENST00000364300 164 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 MIR491-201ENST00000384877 84 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 SEPT7P2-202ENST00000398921 823 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM4Q9C037 SNORA3C-201ENST00000408792 125 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC018644.1-201ENST00000429934 551 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms