Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 MRPS35P3-201ENST00000603189 709 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AC091488.1-201ENST00000604239 660 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AL133338.2-201ENST00000604292 736 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AC024257.5-201ENST00000612739 531 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AC079395.3-201ENST00000615161 484 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AC123768.4-201ENST00000616244 701 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.77□□□□□ -1.49
RTFDC1Q9BY42 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AL138820.1-201ENST00000617901 5305 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC009643.2-201ENST00000603543 1448 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 RNU6-707P-201ENST00000364647 95 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 ERHP2-201ENST00000402323 299 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 GSTA8P-201ENST00000404253 637 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 RNU6-575P-201ENST00000411326 105 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 KRR1P1-201ENST00000419430 803 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC010099.3-201ENST00000423896 409 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 KCTD10P1-201ENST00000434203 625 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AL353597.2-202ENST00000434901 373 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC239367.2-201ENST00000447309 705 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 PNPLA4P1-201ENST00000458328 305 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC007016.1-201ENST00000512110 244 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC008494.2-201ENST00000514544 370 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 NPM1P6-201ENST00000521088 871 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC015688.2-201ENST00000584523 262 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 GAS5-AS1-201ENST00000602767 694 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AC067959.1-201ENST00000604334 379 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AL133243.1-201ENST00000614487 366 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 Z99129.2-201ENST00000619967 314 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 AP000484.1-201ENST00000620067 1252 ntBASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RTFDC1Q9BY42 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AP005901.5-201ENST00000545779 1796 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 RPL21P67-201ENST00000402896 478 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 SFR1P1-201ENST00000403720 688 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 RN7SKP199-201ENST00000410325 305 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 RN7SKP263-201ENST00000411194 309 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AL450992.3-201ENST00000413192 568 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC079809.1-201ENST00000415468 276 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC005005.2-201ENST00000420779 380 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC007435.1-201ENST00000421086 415 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 RPS27AP12-201ENST00000429552 465 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 MTCO1P54-201ENST00000430139 712 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AL451139.1-201ENST00000434718 346 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 RPS4XP12-201ENST00000461747 709 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms