Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC068831.8-201ENST00000620171 435 ntBASIC5.85□□□□□ -1.47
CITED4Q96RK1 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 U6.114-201ENST00000636407 96 ntBASIC5.85□□□□□ -1.47
CITED4Q96RK1 RPL36AP21-202ENST00000639134 430 ntBASIC5.85□□□□□ -1.47
CITED4Q96RK1 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 GTF2IP4-201ENST00000453092 2054 ntBASIC5.85□□□□□ -1.47
CITED4Q96RK1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CITED4Q96RK1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CITED4Q96RK1 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC009120.2-204ENST00000621548 2032 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC125232.1-201ENST00000452554 1408 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 PHKBP1-201ENST00000450951 1951 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 U3.14-201ENST00000365363 227 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 Y_RNA.394-201ENST00000383942 103 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL356967.1-201ENST00000406305 431 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 RPSAP44-201ENST00000406712 884 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL713922.1-201ENST00000416477 747 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 PSMA2P3-201ENST00000429685 675 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC000362.1-201ENST00000433725 425 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 ATP5LP4-201ENST00000434169 307 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL359265.2-201ENST00000434367 631 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL590682.1-201ENST00000437248 344 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 HMGB1P18-201ENST00000438801 619 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL356133.1-201ENST00000444762 372 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 MTND4P19-201ENST00000446659 478 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 MTND1P9-201ENST00000453775 944 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AL590639.1-201ENST00000456484 337 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC018475.1-201ENST00000478358 465 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC008496.1-201ENST00000509131 295 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 TTC39CP1-201ENST00000512513 755 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 IGLV10-67-201ENST00000519446 325 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 FAM60DP-201ENST00000524174 632 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 OR7E87P-201ENST00000532397 929 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC090651.1-201ENST00000567865 634 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 MIR3135A-201ENST00000578460 77 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 AC006329.2-201ENST00000611491 394 ntBASIC5.84□□□□□ -1.47
CITED4Q96RK1 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CITED4Q96RK1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CITED4Q96RK1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CITED4Q96RK1 MTCO1P11-201ENST00000429111 1528 ntBASIC5.84□□□□□ -1.48
CITED4Q96RK1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CITED4Q96RK1 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CITED4Q96RK1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CITED4Q96RK1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.83□□□□□ -1.48
CITED4Q96RK1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CITED4Q96RK1 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CITED4Q96RK1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CITED4Q96RK1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CITED4Q96RK1 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CITED4Q96RK1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.83□□□□□ -1.48
CITED4Q96RK1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.83□□□□□ -1.48
CITED4Q96RK1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CITED4Q96RK1 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms