Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC006504.1-201ENST00000562493 3666 ntBASIC3.05□□□□□ -1.92
GAFA1Q96PS6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.05□□□□□ -1.92
GAFA1Q96PS6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC007685.1-201ENST00000329806 452 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 MIR554-201ENST00000384874 96 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC245054.1-201ENST00000420944 258 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC007389.2-201ENST00000434630 306 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 RPS3AP46-201ENST00000448352 682 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC002553.2-201ENST00000453217 340 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 APOOP2-201ENST00000461561 539 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AL672167.3-201ENST00000465951 960 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 RN7SL542P-201ENST00000467147 294 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC008489.1-201ENST00000524271 483 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC107016.1-201ENST00000550463 337 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC023161.2-201ENST00000551218 780 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AC119674.1-207ENST00000641355 633 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 OR6C71P-202ENST00000641886 1107 ntBASIC3.04□□□□□ -1.92
GAFA1Q96PS6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GAFA1Q96PS6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AP001486.2-201ENST00000561652 5113 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 RNA5SP51-201ENST00000364750 119 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 MIR134-201ENST00000385258 73 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 RPL21P17-201ENST00000397467 475 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL035423.1-201ENST00000420331 213 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC122718.1-201ENST00000439448 744 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 HMGB3P9-201ENST00000441799 583 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL591363.1-201ENST00000450091 483 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 OR52Y1P-201ENST00000452418 828 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 MTCO3P20-201ENST00000454926 688 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 FAM133DP-201ENST00000464802 691 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 RPS6P4-201ENST00000494693 758 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 RANP9-201ENST00000519957 271 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 GTF2IP22-201ENST00000554443 182 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC099489.2-201ENST00000574976 260 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL008729.2-201ENST00000606393 473 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL158062.1-201ENST00000619632 745 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL161637.1-201ENST00000622380 412 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL732618.1-201ENST00000623251 301 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL356863.1-201ENST00000623378 1080 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GAFA1Q96PS6 AL161912.2-201ENST00000565707 3007 ntBASIC3.03□□□□□ -1.92
GAFA1Q96PS6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.03□□□□□ -1.93
GAFA1Q96PS6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 AC083899.2-201ENST00000423285 1376 ntBASIC3.02□□□□□ -1.93
GAFA1Q96PS6 MFSD8-236ENST00000641509 4050 ntBASIC3.02□□□□□ -1.93
GAFA1Q96PS6 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.02□□□□□ -1.93
GAFA1Q96PS6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.02□□□□□ -1.93
GAFA1Q96PS6 RPS26P47-201ENST00000427219 348 ntBASIC3.02□□□□□ -1.93
GAFA1Q96PS6 SKP1P1-201ENST00000438081 489 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms