Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AL049745.1-201ENST00000433953 286 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AL590399.6-201ENST00000446396 307 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 HMGN2P21-201ENST00000447764 270 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 TPT1P13-201ENST00000449760 499 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 RPS5P7-201ENST00000456664 608 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC010469.1-201ENST00000463864 576 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 GAPDHP36-201ENST00000480688 918 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC078817.1-201ENST00000492623 435 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 RPL5P23-201ENST00000496040 868 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 OR5H3P-201ENST00000502817 919 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 OR51K1P-201ENST00000510214 950 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 RNA5SP392-201ENST00000516905 112 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AP003168.1-201ENST00000530091 307 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AL049839.1-201ENST00000556151 657 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 MTCYBP28-201ENST00000566728 1132 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AL121932.1-201ENST00000605542 214 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC021851.1-201ENST00000608537 1082 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC015813.4-201ENST00000610469 179 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC138649.5-201ENST00000637456 137 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VMP1Q96GC9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VMP1Q96GC9 AL132640.2-201ENST00000559968 1698 ntBASIC4.51□□□□□ -1.69
VMP1Q96GC9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VMP1Q96GC9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VMP1Q96GC9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 RNU6-1151P-201ENST00000384684 107 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 U3.30-201ENST00000391308 210 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 PTGES3P2-201ENST00000407942 482 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 RN7SKP100-201ENST00000411258 284 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AL390879.2-203ENST00000426943 1121 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 RPL36P19-201ENST00000430744 301 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 NRBF2P3-201ENST00000432731 865 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC104651.2-201ENST00000447549 528 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC010733.1-201ENST00000451515 401 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 RN7SL41P-201ENST00000476144 297 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 RPS27P23-201ENST00000487608 251 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC104971.1-201ENST00000495117 578 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC068305.1-201ENST00000497406 726 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC023141.12-201ENST00000512399 199 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC016065.2-201ENST00000514530 444 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 IGKV1-32-201ENST00000519290 311 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AP001880.2-201ENST00000538233 448 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 EIF5A2P1-201ENST00000564027 460 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC006270.2-201ENST00000578523 652 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 SLC25A36P1-201ENST00000590111 465 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 FAM27B-201ENST00000610601 213 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC023043.4-201ENST00000612081 449 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 MIR8084-201ENST00000614105 89 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AL162574.2-201ENST00000614618 657 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC012414.7-202ENST00000622705 1090 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC073342.3-201ENST00000624211 193 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC025263.3-201ENST00000622965 1396 ntBASIC4.5□□□□□ -1.69
VMP1Q96GC9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VMP1Q96GC9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VMP1Q96GC9 AC066616.2-201ENST00000559334 1481 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC009643.2-201ENST00000603543 1448 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 RNA5SP191-201ENST00000362585 102 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms