Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MTCYBP12-201ENST00000440559 1134 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AL035551.1-201ENST00000446931 348 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC243772.1-201ENST00000451620 410 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 SNORD11.1-201ENST00000459482 85 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 MTCO2P6-201ENST00000463134 685 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 RPL7AP28-201ENST00000464513 571 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC020898.1-201ENST00000474167 787 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC025164.1-201ENST00000496249 478 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC022022.2-201ENST00000602989 360 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 Z82195.1-201ENST00000604558 398 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC011374.2-201ENST00000607135 526 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AL355493.4-201ENST00000618530 292 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC140113.4-201ENST00000622087 222 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC068057.2-201ENST00000624047 895 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
TM9SF4Q92544 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
TM9SF4Q92544 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TM9SF4Q92544 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 VN2R3P-201ENST00000422626 1412 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AL355578.1-201ENST00000607405 1328 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 U6.112-201ENST00000384129 70 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 RNU1-82P-201ENST00000390851 165 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 AL136131.1-201ENST00000406079 803 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 RNA5SP146-201ENST00000410743 123 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 MTND2P16-201ENST00000419987 799 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC011998.1-201ENST00000433403 117 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AL591719.1-201ENST00000444669 744 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 GTF2IP12-201ENST00000456547 356 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 PPIAP21-201ENST00000464473 501 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC103987.1-201ENST00000473394 348 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 RPS4XP6-201ENST00000477670 797 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 METTL15P1-201ENST00000481421 1045 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC134050.1-201ENST00000495088 933 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC026414.1-201ENST00000504046 698 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AF186190.1-201ENST00000517470 480 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC027455.1-201ENST00000574104 594 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 GAS5-AS1-201ENST00000602767 694 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC025811.1-201ENST00000604312 472 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC100847.1-201ENST00000611316 481 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 MIR6716-201ENST00000613413 80 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 MLECP1-201ENST00000615893 709 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AP000484.1-201ENST00000620067 1252 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC015908.5-201ENST00000623289 343 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 AC120349.3-201ENST00000624377 529 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 CU459211.1-201ENST00000635667 749 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TM9SF4Q92544 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM9SF4Q92544 DDX18P3-201ENST00000404856 2007 ntBASIC4.33□□□□□ -1.72
TM9SF4Q92544 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.32□□□□□ -1.72
TM9SF4Q92544 ZNF849P-201ENST00000594711 1566 ntBASIC4.32□□□□□ -1.72
TM9SF4Q92544 AP000756.2-201ENST00000624168 2567 ntBASIC4.32□□□□□ -1.72
TM9SF4Q92544 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TM9SF4Q92544 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF4Q92544 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
TM9SF4Q92544 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.32□□□□□ -1.72
TM9SF4Q92544 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF4Q92544 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.32□□□□□ -1.72
TM9SF4Q92544 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM9SF4Q92544 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms