Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AL031320.1-201ENST00000604177 357 ntBASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 AC087385.3-201ENST00000620477 187 ntBASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 AC083865.1-201ENST00000636634 831 ntBASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRUB1Q8WWH5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 RNU6-146P-201ENST00000384602 108 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 VTA1P1-201ENST00000414044 866 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 SNRPFP1-201ENST00000414761 252 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AL158050.1-201ENST00000416077 457 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC019050.1-201ENST00000418508 492 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AL139095.3-201ENST00000419672 1203 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 VDAC1P6-201ENST00000430062 855 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC005189.1-201ENST00000431286 310 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 FTH1P16-201ENST00000435241 552 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 RPL7P29-201ENST00000437151 728 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 ARL5AP2-201ENST00000444698 533 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 MTCO3P20-201ENST00000454926 688 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC008953.1-201ENST00000497334 318 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 HPRT1P2-201ENST00000505250 544 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC147055.3-201ENST00000510547 851 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC025260.1-201ENST00000548858 430 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC104229.1-201ENST00000561364 255 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC079148.1-201ENST00000565944 819 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC104662.1-201ENST00000604448 511 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 OR2BH1P-201ENST00000608850 864 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 AC095038.2-201ENST00000621464 1070 ntBASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRUB1Q8WWH5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AL353743.4-201ENST00000422653 1547 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 RNA5SP507-201ENST00000363603 121 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 RNU1-130P-201ENST00000363930 160 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 RPL23AP27-201ENST00000415161 451 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC009965.2-201ENST00000425328 970 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 CYCSP42-201ENST00000450823 238 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 MTCO3P16-201ENST00000454456 754 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 CYCSP53-201ENST00000455540 265 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC078857.1-201ENST00000469870 667 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AL161747.1-201ENST00000480068 358 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 RN7SL271P-201ENST00000487601 295 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC008628.1-201ENST00000508663 265 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC010285.3-201ENST00000511668 676 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.81□□□□□ -1.8
TRUB1Q8WWH5 AP001781.1-201ENST00000530977 207 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms