Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC024909.2-201ENST00000553035 286 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 CYCSP40-201ENST00000575927 294 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 NTAN1P1-201ENST00000603150 646 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC245389.1-201ENST00000605141 529 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC103591.3-201ENST00000608684 209 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 VIS1.1-201ENST00000610517 203 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE4Q8N205 AL603755.1-201ENST00000619504 163 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 AL023881.1-201ENST00000621088 301 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC091965.5-201ENST00000624785 342 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 RNA5SP196-201ENST00000625967 102 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 ZFRP1-201ENST00000457579 2970 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE4Q8N205 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE4Q8N205 AC004656.1-201ENST00000568479 4951 ntBASIC5.74□□□□□ -1.49
SYNE4Q8N205 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE4Q8N205 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE4Q8N205 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 AC112198.2-201ENST00000426589 6996 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 SNORA71.2-201ENST00000364941 134 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 ATF1P1-201ENST00000406040 927 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 U3.35-201ENST00000408405 208 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 TMBIM7P-201ENST00000418074 855 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AL034379.1-201ENST00000423216 253 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 OR5BE1P-201ENST00000425977 939 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 NANOGP2-201ENST00000435391 727 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AC004938.1-201ENST00000438468 308 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 PTENP1-201ENST00000447117 1215 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 RPL7P19-201ENST00000469948 618 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 MTCO3P7-201ENST00000510008 774 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 NPM1P21-201ENST00000513394 762 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 RNU6-1028P-201ENST00000517164 93 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AC006349.1-201ENST00000555526 235 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 AP001981.2-201ENST00000603241 418 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AC002069.2-201ENST00000603580 883 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AL159169.2-201ENST00000610061 1269 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 TUSC7.1-201ENST00000610969 165 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AL031658.2-201ENST00000616850 651 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 OR5BE1P-202ENST00000641168 1176 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SYNE4Q8N205 STX3-208ENST00000641815 3236 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AL121950.1-201ENST00000624993 2077 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 AC092111.2-201ENST00000611627 1414 ntBASIC5.73□□□□□ -1.49
SYNE4Q8N205 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE4Q8N205 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC017104.4-201ENST00000636283 1592 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MTND5P11-201ENST00000511037 1812 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MCTS2P-201ENST00000394552 546 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC233289.1-201ENST00000403700 508 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 GSTA8P-201ENST00000404253 637 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL021407.1-201ENST00000404531 386 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 Y_RNA.604-201ENST00000410574 102 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 SNRPFP1-201ENST00000414761 252 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 ELOCP9-201ENST00000418624 239 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 EIF4HP2-201ENST00000424380 563 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL136231.1-201ENST00000429407 730 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL138787.1-202ENST00000437804 898 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC092393.1-201ENST00000439625 742 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 HSFY3P-201ENST00000444242 1191 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC068135.1-201ENST00000446164 246 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 EXTL2P1-201ENST00000446218 416 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC114755.5-201ENST00000447760 831 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL589880.1-201ENST00000448271 287 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms