Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL139811.1-201ENST00000424779 2299 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 HMGN2P8-201ENST00000391458 268 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL589655.1-201ENST00000405398 482 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 RN7SKP182-201ENST00000410772 298 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 CHIAP3-201ENST00000423668 1133 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 NPM1P34-201ENST00000428821 893 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 USP9YP9-201ENST00000429406 715 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 RPL7P4-203ENST00000430239 730 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC114878.1-201ENST00000441166 358 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 FABP3P2-201ENST00000453169 399 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 RN7SL93P-201ENST00000463035 293 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC010683.1-201ENST00000473673 378 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC108157.1-201ENST00000510511 539 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC010476.1-201ENST00000519111 851 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 OR8G5-201ENST00000524943 1041 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 TVP23BP1-201ENST00000557500 617 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC009101.1-201ENST00000568135 242 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC025627.2-201ENST00000576220 160 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 RPL12P25-202ENST00000598100 674 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 MIR6780A-201ENST00000615089 68 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC123768.4-201ENST00000616244 701 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AL645927.2-201ENST00000618350 349 ntBASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUDCD3Q8IVD9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 OR11H4-201ENST00000315409 1082 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 MIR129-1-201ENST00000384972 72 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 RNA5SP498-201ENST00000411342 120 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AMD1P2-201ENST00000412936 992 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC009965.2-201ENST00000425328 970 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 RPL23AP1-201ENST00000428990 471 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 MTND3P4-201ENST00000453537 303 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC092691.2-201ENST00000461787 803 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 RPL21P71-201ENST00000465598 459 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 RPL7P1-201ENST00000468161 747 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 RPL7P9-201ENST00000468715 747 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 HMGB3P14-201ENST00000494195 599 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 RNU6-1004P-201ENST00000516584 111 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 MIR4644-201ENST00000579929 84 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC015911.5-201ENST00000587076 451 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 EIF1P6-201ENST00000600054 334 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 MTCO3P22-201ENST00000603219 784 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC079791.1-201ENST00000605356 973 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC124312.6-202ENST00000623624 418 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 LINC00561-201ENST00000565815 2738 ntBASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUDCD3Q8IVD9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NUDCD3Q8IVD9 AC008725.1-201ENST00000605123 2263 ntBASIC3.97□□□□□ -1.77
NUDCD3Q8IVD9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.97□□□□□ -1.77
NUDCD3Q8IVD9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUDCD3Q8IVD9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NUDCD3Q8IVD9 AC053481.2-202ENST00000582394 1500 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms