Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC007998.1-201ENST00000474156 672 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC068724.1-201ENST00000487100 792 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 HMGB3P16-201ENST00000508037 287 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 RN7SKP99-201ENST00000517028 307 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 SMARCE1P4-201ENST00000523647 241 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 RN7SL435P-201ENST00000584418 282 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC018695.5-201ENST00000605872 315 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC004948.1-201ENST00000609858 672 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC008443.7-201ENST00000622195 246 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC124312.6-202ENST00000623624 418 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC011447.7-201ENST00000624228 1590 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 Z95327.2-201ENST00000414579 1873 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AC096656.1-201ENST00000623826 1364 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 AL353743.4-201ENST00000422653 1547 ntBASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD4Q6ZW05 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 RNA5SP234-201ENST00000363916 119 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 SNORA4.1-201ENST00000364263 144 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL133388.1-201ENST00000404509 287 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 OR4K12P-201ENST00000406538 961 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 RNU6-272P-201ENST00000411028 104 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 Z93019.1-201ENST00000416450 973 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 RPL31P54-201ENST00000429803 370 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 CLUHP1-201ENST00000435012 1190 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 MTND1P34-201ENST00000438556 671 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL390119.1-201ENST00000440329 312 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC064862.4-201ENST00000442180 334 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC073109.1-201ENST00000445066 978 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AP000936.2-201ENST00000447151 681 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 IFNWP4-201ENST00000453148 294 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 DDX39BP2-208ENST00000453923 258 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC010307.1-201ENST00000467206 836 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC094085.1-201ENST00000468914 584 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ATP1B1P1-201ENST00000509767 915 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC010285.3-201ENST00000511668 676 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AP001189.2-201ENST00000527320 189 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC073429.2-201ENST00000569694 1444 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 MIR4505-201ENST00000582238 73 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 RSL24D1P11-201ENST00000591045 491 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC112220.3-201ENST00000605502 502 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL353600.1-201ENST00000608148 251 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC000068.2-201ENST00000608816 460 ntBASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD4Q6ZW05 AL133243.1-201ENST00000614487 366 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms