Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RC3H1Q5TC82 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RC3H1Q5TC82 PABPC1P6-201ENST00000445594 1829 ntBASIC7.52□□□□□ -1.2
RC3H1Q5TC82 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 CDR1-202ENST00000625883 1485 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 CASC19-221ENST00000641309 1382 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 RNU1-24P-201ENST00000364285 165 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 Y_RNA.395-201ENST00000383945 109 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 SNORA32.2-201ENST00000384049 122 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 RPL32P23-201ENST00000397237 405 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AL450338.1-201ENST00000407987 512 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC109583.1-201ENST00000432156 268 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AL390119.1-201ENST00000440329 312 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 NPM1P39-201ENST00000449818 867 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AL606490.1-201ENST00000452266 765 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC099563.1-201ENST00000456086 418 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC093270.2-201ENST00000486157 792 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 RPL17P2-201ENST00000491913 451 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 NRBF2P4-201ENST00000520874 850 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 MRPS16P1-201ENST00000523462 412 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC018558.5-201ENST00000565840 952 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC141257.3-201ENST00000572906 215 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AC016583.1-201ENST00000624221 2431 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 ZNF519P1-201ENST00000449011 1626 ntBASIC7.52□□□□□ -1.21
RC3H1Q5TC82 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RC3H1Q5TC82 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 NCOA4P3-201ENST00000513203 1877 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 RNU4-31P-201ENST00000384211 141 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 RNU6-1222P-201ENST00000384615 107 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 MIR640-201ENST00000385086 96 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 MIR16-1-201ENST00000385271 89 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 RNU6-1068P-201ENST00000410958 103 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC092745.2-202ENST00000411880 369 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC083875.1-201ENST00000419509 405 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC062016.2-201ENST00000420950 676 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 RPL7P57-201ENST00000423238 740 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC099677.3-201ENST00000427081 395 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 PPIAP17-201ENST00000438507 471 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 DNAJC19P8-201ENST00000452887 259 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 SDC4P-201ENST00000453285 601 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 MRPS17P3-201ENST00000465453 385 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC010655.3-201ENST00000478818 450 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 RPL23AP40-201ENST00000487630 390 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 RNA5SP92-201ENST00000516437 110 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 BTF3P12-201ENST00000519620 469 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AP005639.1-201ENST00000526939 192 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 SCOCP1-201ENST00000554676 349 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC015720.2-201ENST00000567709 334 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC068790.5-201ENST00000602741 355 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AC093913.1-201ENST00000614178 329 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 AP000473.2-201ENST00000602659 1537 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms