Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX4Q33E94 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RFX4Q33E94 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AC090948.1-201ENST00000607464 549 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 FAM27D1-201ENST00000612308 341 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 AC145207.9-201ENST00000623802 325 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX4Q33E94 OR5AC4P-202ENST00000642086 985 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 AL132640.2-201ENST00000559968 1698 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 AL139811.1-201ENST00000424779 2299 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RFX4Q33E94 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
RFX4Q33E94 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 NRBF2P2-201ENST00000413087 861 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.76□□□□□ -1.81
RFX4Q33E94 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 MTCO3P16-201ENST00000454456 754 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC011037.1-201ENST00000483964 558 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 RPS23P1-201ENST00000491662 432 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 RPL29P14-201ENST00000495837 428 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AK3P4-201ENST00000504283 583 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 CDH12P2-201ENST00000504393 298 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC020593.1-201ENST00000507399 299 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC016550.3-201ENST00000515706 767 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 OR8G5-201ENST00000524943 1041 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC092747.2-201ENST00000545069 983 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 CBX3P5-201ENST00000552017 521 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.76□□□□□ -1.81
RFX4Q33E94 RPL23AP87-202ENST00000573039 466 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 MIR4512-201ENST00000583257 77 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 MIR4443-201ENST00000585052 53 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AL133247.2-201ENST00000603236 482 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC084373.1-201ENST00000603311 235 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AC003001.2-201ENST00000616294 831 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 AL591424.2-201ENST00000617023 128 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.76□□□□□ -1.81
RFX4Q33E94 MIR7703-201ENST00000620784 77 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC009452.1-201ENST00000640823 606 ntBASIC3.76□□□□□ -1.81
RFX4Q33E94 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RFX4Q33E94 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX4Q33E94 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.76□□□□□ -1.81
RFX4Q33E94 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RFX4Q33E94 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RFX4Q33E94 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AC017002.4-201ENST00000604721 1525 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RFX4Q33E94 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RFX4Q33E94 HSPA8P1-201ENST00000425843 1833 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL137100.1-201ENST00000556703 1620 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL158163.1-201ENST00000603915 1649 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 RNU6-398P-201ENST00000384143 109 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RNU6-40P-201ENST00000384254 107 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RNU6-31P-201ENST00000384388 108 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL589655.1-201ENST00000405398 482 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RNA5SP239-201ENST00000410218 129 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RN7SKP222-201ENST00000410651 315 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RPL26P37-201ENST00000411983 438 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 NDUFA5P10-201ENST00000432147 357 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL138878.2-201ENST00000440581 1241 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC009263.1-201ENST00000441193 1239 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AC245517.2-201ENST00000442890 346 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.75□□□□□ -1.81
RFX4Q33E94 EXTL2P1-201ENST00000446218 416 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RPS20P4-201ENST00000461659 355 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC109327.1-201ENST00000471666 403 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AP000926.1-201ENST00000479573 241 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 OR52A4P-202ENST00000481634 799 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms