Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AL133243.3-201ENST00000617415 3004 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SCN1BQ07699 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN1BQ07699 RNU6-441P-201ENST00000384545 106 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 RPL7P27-201ENST00000403775 720 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 MTCO3P31-201ENST00000405526 789 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 RNU6-575P-201ENST00000411326 105 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 RPS3AP9-201ENST00000417027 792 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 NANOGP6-201ENST00000429190 847 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 USP9YP7-201ENST00000436723 430 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AL137845.2-201ENST00000444292 988 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AL163193.1-201ENST00000444895 788 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN1BQ07699 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN1BQ07699 OR52J1P-201ENST00000450596 932 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 USP9YP32-201ENST00000452432 430 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC244505.3-201ENST00000454598 187 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.17□□□□□ -1.74
SCN1BQ07699 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC097484.1-201ENST00000471148 389 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 RN7SL319P-201ENST00000480656 221 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC005726.1-201ENST00000494679 427 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 COX6B1P5-201ENST00000509843 249 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC048346.1-201ENST00000510247 144 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 RN7SKP66-201ENST00000516681 231 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AC007225.2-201ENST00000562529 256 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN1BQ07699 SNORA74C-1-201ENST00000580726 201 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AL354760.1-201ENST00000608357 643 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC020634.1-201ENST00000608701 549 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC124312.6-202ENST00000623624 418 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AL138960.2-201ENST00000625145 535 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AC126544.2-201ENST00000625174 749 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN1BQ07699 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN1BQ07699 AL355852.1-201ENST00000454081 1771 ntBASIC4.17□□□□□ -1.74
SCN1BQ07699 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN1BQ07699 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SCN1BQ07699 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 MTND5P31-201ENST00000419366 1374 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 RNU1-85P-201ENST00000364127 164 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 RNU6-1226P-201ENST00000384317 107 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SCN1BQ07699 SSXP10-201ENST00000402595 565 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AL603766.1-201ENST00000407763 664 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 U3.36-201ENST00000408418 213 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC096533.1-201ENST00000411645 353 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 BMS1P13-201ENST00000417301 885 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC079355.1-201ENST00000421770 223 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AL451139.1-201ENST00000434718 346 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.16□□□□□ -1.74
SCN1BQ07699 RPL34P20-201ENST00000442771 351 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 OR7E125P-201ENST00000443450 846 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 HMGN3P1-201ENST00000453847 193 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms