Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
EPHB3P54753 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
EPHB3P54753 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 HMGB3P18-201ENST00000406327 590 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 FCF1P10-201ENST00000407590 479 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 RNU6-575P-201ENST00000411326 105 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 RPL23AP27-201ENST00000415161 451 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 FABP7P1-201ENST00000424004 391 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC108075.1-201ENST00000424692 529 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 RPS27P18-201ENST00000431701 247 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 GSTM5P1-201ENST00000434751 660 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 RPS25P9-201ENST00000435591 252 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.75□□□□□ -1.49
EPHB3P54753 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EPHB3P54753 AC007677.1-201ENST00000445757 515 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 RPL23AP35-201ENST00000451906 501 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 RPS20P24-201ENST00000457473 361 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 SNORD42A-201ENST00000459584 64 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 RN7SL222P-201ENST00000476452 299 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC098583.1-201ENST00000480875 255 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC013828.1-201ENST00000481845 158 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC097173.1-201ENST00000505862 819 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 Y_RNA.701-201ENST00000516812 110 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC022832.1-201ENST00000530718 645 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.75□□□□□ -1.49
EPHB3P54753 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 PCMTD1P2-201ENST00000565017 355 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AL391840.1-201ENST00000571144 367 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.75□□□□□ -1.49
EPHB3P54753 MIR4420-201ENST00000583944 77 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 DUXAP4-201ENST00000603046 613 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC009033.1-201ENST00000624279 431 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EPHB3P54753 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC007342.5-201ENST00000571340 2142 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.75□□□□□ -1.49
EPHB3P54753 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.75□□□□□ -1.49
EPHB3P54753 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EPHB3P54753 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 AC011933.2-201ENST00000578539 2790 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.74□□□□□ -1.49
EPHB3P54753 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 RNU6-374P-201ENST00000364146 108 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 AL672167.2-201ENST00000377164 879 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 SNORD65.1-201ENST00000390889 71 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 RN7SKP213-201ENST00000410746 298 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.74□□□□□ -1.49
EPHB3P54753 RPL21P111-201ENST00000418453 477 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.74□□□□□ -1.49
EPHB3P54753 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC009237.2-201ENST00000421358 284 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 FO393419.3-201ENST00000428741 282 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.74□□□□□ -1.49
EPHB3P54753 MTND4LP10-201ENST00000435146 291 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.74□□□□□ -1.49
EPHB3P54753 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC005002.1-201ENST00000447458 540 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 RPL30P9-201ENST00000465586 330 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 RPS18P6-201ENST00000476880 458 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.74□□□□□ -1.49
EPHB3P54753 PTGES3P3-201ENST00000511479 482 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 AC108120.2-201ENST00000512973 294 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC087808.1-201ENST00000520501 361 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.74□□□□□ -1.49
EPHB3P54753 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
EPHB3P54753 AL049870.4-201ENST00000555741 486 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 NPM1P42-201ENST00000560329 862 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.74□□□□□ -1.49
EPHB3P54753 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC098614.4-201ENST00000607601 462 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC024560.3-201ENST00000608482 349 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 OR8G7P-201ENST00000616658 848 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 AC018816.2-201ENST00000621460 353 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms