Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 AC092104.1-201ENST00000497346 1441 ntBASIC5.91□□□□□ -1.46
MRE11P49959 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 SCN1A-220ENST00000641603 12506 ntBASIC5.9□□□□□ -1.46
MRE11P49959 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
MRE11P49959 AC000123.3-201ENST00000624029 4975 ntBASIC5.9□□□□□ -1.46
MRE11P49959 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MRE11P49959 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MRE11P49959 NACA3P-201ENST00000359690 648 ntBASIC5.9□□□□□ -1.46
MRE11P49959 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MRE11P49959 RNU1-94P-201ENST00000362627 173 ntBASIC5.9□□□□□ -1.46
MRE11P49959 RNA5SP234-201ENST00000363916 119 ntBASIC5.9□□□□□ -1.46
MRE11P49959 MIR551A-201ENST00000385042 96 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AL592291.1-201ENST00000403830 352 ntBASIC5.9□□□□□ -1.46
MRE11P49959 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.9□□□□□ -1.46
MRE11P49959 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.9□□□□□ -1.46
MRE11P49959 AC010385.1-201ENST00000412374 256 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC004074.1-201ENST00000421810 1063 ntBASIC5.9□□□□□ -1.46
MRE11P49959 FABP7P1-201ENST00000424004 391 ntBASIC5.9□□□□□ -1.46
MRE11P49959 CKS1BP6-201ENST00000424932 240 ntBASIC5.9□□□□□ -1.46
MRE11P49959 USP9YP9-201ENST00000429406 715 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MRE11P49959 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 YWHAZP7-201ENST00000436906 631 ntBASIC5.9□□□□□ -1.46
MRE11P49959 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 AC073587.1-201ENST00000447093 876 ntBASIC5.9□□□□□ -1.46
MRE11P49959 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.9□□□□□ -1.46
MRE11P49959 NPM1P49-201ENST00000448027 714 ntBASIC5.9□□□□□ -1.46
MRE11P49959 RHEBP2-201ENST00000450289 600 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 AC104689.1-201ENST00000473356 768 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 NRBF2P4-201ENST00000520874 850 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.9□□□□□ -1.46
MRE11P49959 DUXAP1-201ENST00000556632 463 ntBASIC5.9□□□□□ -1.46
MRE11P49959 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.9□□□□□ -1.46
MRE11P49959 AC006116.3-201ENST00000592968 361 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.9□□□□□ -1.46
MRE11P49959 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.9□□□□□ -1.46
MRE11P49959 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.9□□□□□ -1.46
MRE11P49959 AL031281.1-201ENST00000604049 488 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC087783.2-201ENST00000605070 562 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AL392112.1-201ENST00000605115 829 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC073114.1-201ENST00000612027 490 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC107075.1-201ENST00000613695 314 ntBASIC5.9□□□□□ -1.46
MRE11P49959 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC073569.3-201ENST00000619055 682 ntBASIC5.9□□□□□ -1.46
MRE11P49959 AC092159.4-201ENST00000624944 550 ntBASIC5.9□□□□□ -1.46
MRE11P49959 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.9□□□□□ -1.46
MRE11P49959 AC108751.5-201ENST00000492880 1336 ntBASIC5.9□□□□□ -1.47
MRE11P49959 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MRE11P49959 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.9□□□□□ -1.47
MRE11P49959 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
MRE11P49959 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
MRE11P49959 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
MRE11P49959 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 AC104297.1-201ENST00000393779 870 ntBASIC5.89□□□□□ -1.47
MRE11P49959 RNA5SP146-201ENST00000410743 123 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC004022.2-201ENST00000413824 193 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC006960.1-201ENST00000419980 153 ntBASIC5.89□□□□□ -1.47
MRE11P49959 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 DSTNP5-201ENST00000427921 523 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
MRE11P49959 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 RPS23P7-201ENST00000466210 444 ntBASIC5.89□□□□□ -1.47
MRE11P49959 RN7SL51P-201ENST00000468230 285 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC096741.1-201ENST00000472250 846 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC058823.1-201ENST00000485315 474 ntBASIC5.89□□□□□ -1.47
MRE11P49959 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 AC093824.1-201ENST00000508796 343 ntBASIC5.89□□□□□ -1.47
MRE11P49959 MTND6P2-201ENST00000512226 524 ntBASIC5.89□□□□□ -1.47
MRE11P49959 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.89□□□□□ -1.47
MRE11P49959 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.89□□□□□ -1.47
MRE11P49959 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms