Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 DDX18P3-201ENST00000404856 2007 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 RNU11-4P-201ENST00000391149 133 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 SNORD66.1-201ENST00000391230 76 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 RPL31P52-201ENST00000407532 367 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 RN7SKP159-201ENST00000410657 292 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 VTA1P1-201ENST00000414044 866 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 UBTFL3-201ENST00000418934 1024 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 HMGB3P5-201ENST00000428894 612 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 GEMIN8P3-201ENST00000445417 720 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 ATP5G1P3-201ENST00000463301 410 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 UBTFL6-201ENST00000477929 1024 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AP002812.1-201ENST00000495378 474 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC104164.2-201ENST00000496953 495 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 HPRT1P2-201ENST00000505250 544 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 FTH1P21-201ENST00000512179 511 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 AL121594.4-201ENST00000556211 1196 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 CR392039.4-201ENST00000624968 501 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AP000720.1-201ENST00000625091 483 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 AC083865.1-201ENST00000636634 831 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 EOGT-210ENST00000615922 1931 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 USP9YP4-201ENST00000424401 1745 ntBASIC4.26□□□□□ -1.73
TNFRSF4P43489 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF4P43489 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFRSF4P43489 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF4P43489 CASC19-261ENST00000641853 1638 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF4P43489 CASC19-204ENST00000641001 2055 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF4P43489 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF4P43489 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF4P43489 AL359837.1-201ENST00000381357 287 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 RNU6-98P-201ENST00000384173 107 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF4P43489 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 PNRC2P1-201ENST00000423940 420 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AC115285.1-201ENST00000424879 736 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 BMS1P19-201ENST00000433925 393 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 RNFT1P2-201ENST00000443064 757 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 TPTE2P6-202ENST00000445572 1007 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AC091959.2-201ENST00000477363 321 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 RWDD4P1-201ENST00000488019 565 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AF213884.1-201ENST00000488102 463 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 UBA52P3-201ENST00000491303 382 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 PPM1AP1-201ENST00000502740 1135 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 AC008628.1-201ENST00000508663 265 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 PGBD4P4-201ENST00000509673 613 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 NPM1P41-201ENST00000512920 831 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 IGKV2-36-201ENST00000519999 223 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 VTA1P2-201ENST00000520205 911 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.25□□□□□ -1.73
TNFRSF4P43489 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AC068446.3-201ENST00000555285 382 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 MIR4716-201ENST00000579628 84 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AC115085.1-201ENST00000588924 229 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AL451086.1-201ENST00000605596 223 ntBASIC4.25□□□□□ -1.73
TNFRSF4P43489 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms