Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFC3P40938 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFC3P40938 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.79
RFC3P40938 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 AC097504.1-201ENST00000515103 2415 ntBASIC3.84□□□□□ -1.79
RFC3P40938 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
RFC3P40938 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RFC3P40938 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 AL078604.1-201ENST00000404609 466 ntBASIC3.84□□□□□ -1.79
RFC3P40938 RPL21P65-201ENST00000406094 466 ntBASIC3.84□□□□□ -1.79
RFC3P40938 RN7SKP33-201ENST00000410942 340 ntBASIC3.84□□□□□ -1.79
RFC3P40938 OR8G2P-201ENST00000412796 908 ntBASIC3.84□□□□□ -1.79
RFC3P40938 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 AL356095.1-201ENST00000417217 199 ntBASIC3.84□□□□□ -1.79
RFC3P40938 RWDD4P2-201ENST00000426392 563 ntBASIC3.84□□□□□ -1.79
RFC3P40938 HSFY6P-201ENST00000445573 403 ntBASIC3.84□□□□□ -1.79
RFC3P40938 RPL23AP81-201ENST00000455252 467 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 RWDD4P1-201ENST00000488019 565 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AC099522.1-202ENST00000514718 367 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.84□□□□□ -1.79
RFC3P40938 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 AC022655.2-201ENST00000577280 318 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 AC015911.5-201ENST00000587076 451 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AC006116.5-201ENST00000591936 559 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AC017076.1-201ENST00000607613 578 ntBASIC3.84□□□□□ -1.79
RFC3P40938 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 AC233309.1-201ENST00000619522 751 ntBASIC3.84□□□□□ -1.79
RFC3P40938 AP006248.2-201ENST00000623309 592 ntBASIC3.84□□□□□ -1.79
RFC3P40938 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.84□□□□□ -1.79
RFC3P40938 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
RFC3P40938 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFC3P40938 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RFC3P40938 FAM91A3P-201ENST00000456826 2544 ntBASIC3.84□□□□□ -1.8
RFC3P40938 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
RFC3P40938 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
RFC3P40938 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
RFC3P40938 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
RFC3P40938 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RFC3P40938 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RFC3P40938 FAM35DP-201ENST00000323387 2712 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AL133412.1-201ENST00000380194 2992 ntBASIC3.83□□□□□ -1.8
RFC3P40938 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFC3P40938 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFC3P40938 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFC3P40938 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.83□□□□□ -1.8
RFC3P40938 VN1R8P-201ENST00000407739 893 ntBASIC3.83□□□□□ -1.8
RFC3P40938 RN7SKP27-201ENST00000410684 333 ntBASIC3.83□□□□□ -1.8
RFC3P40938 RNA5SP498-201ENST00000411342 120 ntBASIC3.83□□□□□ -1.8
RFC3P40938 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.83□□□□□ -1.8
RFC3P40938 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.83□□□□□ -1.8
RFC3P40938 DPY19L1P2-201ENST00000426647 915 ntBASIC3.83□□□□□ -1.8
RFC3P40938 NPM1P24-201ENST00000428039 894 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC073069.1-201ENST00000428657 441 ntBASIC3.83□□□□□ -1.8
RFC3P40938 MRPL50P1-201ENST00000431951 384 ntBASIC3.83□□□□□ -1.8
RFC3P40938 RAD1P2-201ENST00000446414 663 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AL627224.1-201ENST00000448334 444 ntBASIC3.83□□□□□ -1.8
RFC3P40938 MTND6P6-201ENST00000478031 263 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AL132838.2-201ENST00000492041 314 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
RFC3P40938 RNU6-491P-201ENST00000516099 110 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.83□□□□□ -1.8
RFC3P40938 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.83□□□□□ -1.8
RFC3P40938 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.83□□□□□ -1.8
RFC3P40938 RFPL1S-203ENST00000539579 330 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC006064.5-201ENST00000541782 248 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.83□□□□□ -1.8
RFC3P40938 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.83□□□□□ -1.8
RFC3P40938 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
RFC3P40938 CYP4A43P-201ENST00000568156 121 ntBASIC3.83□□□□□ -1.8
RFC3P40938 RPL23AP97-201ENST00000568955 471 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC022916.3-201ENST00000592961 742 ntBASIC3.83□□□□□ -1.8
RFC3P40938 RPL7P50-201ENST00000600588 727 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AL353726.1-201ENST00000614041 1000 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AC139769.3-201ENST00000618383 175 ntBASIC3.83□□□□□ -1.8
RFC3P40938 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
RFC3P40938 LINC02471-203ENST00000641941 4752 ntBASIC3.83□□□□□ -1.8
RFC3P40938 AL592437.2-201ENST00000421655 2434 ntBASIC3.83□□□□□ -1.8
RFC3P40938 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFC3P40938 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFC3P40938 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFC3P40938 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.83□□□□□ -1.8
RFC3P40938 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms