Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 DDX39BP2-208ENST00000453923 258 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 HIGD1AP8-201ENST00000453927 274 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 RPL23AP12-201ENST00000467573 473 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 RN7SL244P-201ENST00000493405 297 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 MRPS33P2-201ENST00000507850 322 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC6A4P31645 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A4P31645 NDUFA5P2-201ENST00000519723 344 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 AC106038.2-201ENST00000520706 568 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC6A4P31645 HIGD1AP10-201ENST00000527837 282 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 NPM1P47-201ENST00000560843 856 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC6A4P31645 NTAN1P1-201ENST00000603150 646 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 AC018714.1-201ENST00000605028 208 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 AC112220.3-201ENST00000605502 502 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 AC005962.2-201ENST00000611427 652 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A4P31645 AC092656.1-203ENST00000624134 423 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 AC084035.1-201ENST00000634543 607 ntBASIC5.21□□□□□ -1.58
SLC6A4P31645 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
SLC6A4P31645 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC6A4P31645 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SLC6A4P31645 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A4P31645 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SLC6A4P31645 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC6A4P31645 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC6A4P31645 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A4P31645 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC6A4P31645 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC6A4P31645 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SLC6A4P31645 MTND4P34-201ENST00000572715 1371 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC096656.1-201ENST00000623826 1364 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC6A4P31645 RNU6-1066P-201ENST00000363573 105 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 Y_RNA.559-201ENST00000384686 107 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 MT-TH-201ENST00000387441 69 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC6A4P31645 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SLC6A4P31645 U3.32-201ENST00000408116 212 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 CHEK2P3-201ENST00000416118 248 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 NPM1P11-201ENST00000417106 855 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC073069.1-201ENST00000428657 441 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 RPL31P54-201ENST00000429803 370 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AL353706.1-201ENST00000436728 494 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 YWHAQP9-201ENST00000445891 512 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 RPL23AP71-201ENST00000470966 469 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC6A4P31645 AC010424.1-201ENST00000506336 297 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 ATP1B1P1-201ENST00000509767 915 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC048346.1-201ENST00000510247 144 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC098976.1-201ENST00000513014 541 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC6A4P31645 Y_RNA.695-201ENST00000516715 107 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A4P31645 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SLC6A4P31645 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A4P31645 AC060788.1-201ENST00000521318 469 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 SMARCE1P4-201ENST00000523647 241 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A4P31645 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A4P31645 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A4P31645 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC6A4P31645 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A4P31645 NMNAT1P1-201ENST00000554095 876 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A4P31645 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 uc_338.9-201ENST00000617424 182 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AC087385.3-201ENST00000620477 187 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AP001784.1-201ENST00000624107 428 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 AL353662.3-201ENST00000625131 237 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 CDRT1-208ENST00000630868 794 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 IRF5P1-201ENST00000504852 2164 ntBASIC5.2□□□□□ -1.58
SLC6A4P31645 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A4P31645 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A4P31645 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms