Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC010740.1-201ENST00000417035 684 ntBASIC5.34□□□□□ -1.55
CPS1P31327 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.34□□□□□ -1.55
CPS1P31327 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CPS1P31327 TMED11P-201ENST00000479478 690 ntBASIC5.34□□□□□ -1.55
CPS1P31327 RAC1P2-201ENST00000511164 579 ntBASIC5.34□□□□□ -1.55
CPS1P31327 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
CPS1P31327 AC006386.2-201ENST00000624491 75 ntBASIC5.34□□□□□ -1.55
CPS1P31327 AC012005.1-201ENST00000624575 75 ntBASIC5.34□□□□□ -1.55
CPS1P31327 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.34□□□□□ -1.55
CPS1P31327 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CPS1P31327 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.34□□□□□ -1.55
CPS1P31327 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CPS1P31327 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CPS1P31327 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CPS1P31327 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CPS1P31327 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CPS1P31327 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.34□□□□□ -1.56
CPS1P31327 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CPS1P31327 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CPS1P31327 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CPS1P31327 SNORD9-201ENST00000362566 104 ntBASIC5.33□□□□□ -1.56
CPS1P31327 RPL7AP73-201ENST00000413490 353 ntBASIC5.33□□□□□ -1.56
CPS1P31327 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.33□□□□□ -1.56
CPS1P31327 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.33□□□□□ -1.56
CPS1P31327 AC026782.2-201ENST00000510845 636 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.33□□□□□ -1.56
CPS1P31327 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.33□□□□□ -1.56
CPS1P31327 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.33□□□□□ -1.56
CPS1P31327 AL773545.4-201ENST00000637262 310 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AL513478.4-201ENST00000641636 310 ntBASIC5.33□□□□□ -1.56
CPS1P31327 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.33□□□□□ -1.56
CPS1P31327 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CPS1P31327 LINC01109-201ENST00000603837 3081 ntBASIC5.33□□□□□ -1.56
CPS1P31327 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CPS1P31327 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CPS1P31327 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AL133383.2-201ENST00000622958 2336 ntBASIC5.33□□□□□ -1.56
CPS1P31327 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CPS1P31327 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CPS1P31327 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CPS1P31327 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CPS1P31327 ATP5JP1-201ENST00000431631 322 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.33□□□□□ -1.56
CPS1P31327 MAPRE1P3-201ENST00000435438 796 ntBASIC5.33□□□□□ -1.56
CPS1P31327 PHBP14-201ENST00000512887 367 ntBASIC5.33□□□□□ -1.56
CPS1P31327 RNA5SP208-201ENST00000516156 78 ntBASIC5.33□□□□□ -1.56
CPS1P31327 Vault.1-201ENST00000516474 102 ntBASIC5.33□□□□□ -1.56
CPS1P31327 IGKV2-38-201ENST00000517443 247 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AC016839.1-201ENST00000578162 867 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AC068020.1-201ENST00000594215 661 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AC010591.1-201ENST00000603941 649 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AC006077.1-201ENST00000604746 343 ntBASIC5.33□□□□□ -1.56
CPS1P31327 AC110801.1-201ENST00000623590 212 ntBASIC5.33□□□□□ -1.56
CPS1P31327 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CPS1P31327 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.32□□□□□ -1.56
CPS1P31327 RNA5SP374-201ENST00000362939 125 ntBASIC5.32□□□□□ -1.56
CPS1P31327 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 RN7SKP97-201ENST00000410966 333 ntBASIC5.32□□□□□ -1.56
CPS1P31327 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.32□□□□□ -1.56
CPS1P31327 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.32□□□□□ -1.56
CPS1P31327 RPL31P61-201ENST00000496160 376 ntBASIC5.32□□□□□ -1.56
CPS1P31327 RPL7L1P13-201ENST00000511702 739 ntBASIC5.32□□□□□ -1.56
CPS1P31327 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.32□□□□□ -1.56
CPS1P31327 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.32□□□□□ -1.56
CPS1P31327 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.32□□□□□ -1.56
CPS1P31327 MIR7154-201ENST00000620673 73 ntBASIC5.32□□□□□ -1.56
CPS1P31327 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CPS1P31327 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CPS1P31327 MTCO1P24-201ENST00000515438 1558 ntBASIC5.31□□□□□ -1.56
CPS1P31327 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CPS1P31327 RNA5SP126-201ENST00000365092 109 ntBASIC5.31□□□□□ -1.56
CPS1P31327 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.31□□□□□ -1.56
CPS1P31327 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.31□□□□□ -1.56
CPS1P31327 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.31□□□□□ -1.56
CPS1P31327 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.31□□□□□ -1.56
CPS1P31327 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.31□□□□□ -1.56
CPS1P31327 AC005008.1-201ENST00000456151 612 ntBASIC5.31□□□□□ -1.56
CPS1P31327 AC139783.2-201ENST00000504847 1145 ntBASIC5.31□□□□□ -1.56
CPS1P31327 AC118465.1-201ENST00000513820 1271 ntBASIC5.31□□□□□ -1.56
CPS1P31327 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.31□□□□□ -1.56
CPS1P31327 AC022695.1-201ENST00000522089 237 ntBASIC5.31□□□□□ -1.56
CPS1P31327 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.31□□□□□ -1.56
CPS1P31327 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.31□□□□□ -1.56
CPS1P31327 AC013412.1-201ENST00000610687 192 ntBASIC5.31□□□□□ -1.56
CPS1P31327 AL139089.1-201ENST00000620372 975 ntBASIC5.31□□□□□ -1.56
CPS1P31327 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CPS1P31327 MAPK10-303ENST00000641324 3959 ntBASIC5.31□□□□□ -1.56
CPS1P31327 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CPS1P31327 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CPS1P31327 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.31□□□□□ -1.56
CPS1P31327 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CPS1P31327 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CPS1P31327 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms