Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA13P31271 AC005229.2-201ENST00000456995 399 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 RNU6-1218P-201ENST00000458990 108 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA13P31271 RPL21P18-201ENST00000469899 480 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HOXA13P31271 RN7SL809P-201ENST00000482040 297 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 AC005912.1-201ENST00000495392 255 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA13P31271 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA13P31271 AC104108.1-201ENST00000509930 412 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA13P31271 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA13P31271 ATP5F1P7-201ENST00000567330 760 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 AC090666.1-201ENST00000578241 445 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 AC008507.2-201ENST00000588402 1176 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA13P31271 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA13P31271 AC096553.1-201ENST00000605169 829 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 FAM27D1-201ENST00000612308 341 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 ZYXP1-201ENST00000617638 118 ntBASIC4.87□□□□□ -1.63
HOXA13P31271 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HOXA13P31271 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA13P31271 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC107027.3-201ENST00000565095 3473 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 U6.112-201ENST00000384129 70 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AL022722.2-201ENST00000402519 180 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 COX6CP15-201ENST00000426313 211 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AL132765.1-201ENST00000434165 553 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC092170.1-201ENST00000440211 356 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC114755.5-201ENST00000447760 831 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 RPS7P7-201ENST00000463499 571 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 TRBV8-2-201ENST00000475637 270 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AF213884.1-201ENST00000488102 463 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 RPS27AP13-201ENST00000498403 237 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 AL592156.1-201ENST00000508758 304 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 PGBD4P4-201ENST00000509673 613 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 RNU6-415P-201ENST00000516252 97 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 RNA5SP73-201ENST00000516744 108 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC090151.1-201ENST00000520784 730 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AP003066.2-201ENST00000529375 555 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AL121594.4-201ENST00000556211 1196 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC027104.1-201ENST00000563702 681 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC010735.1-201ENST00000567305 1026 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 MIR4789-201ENST00000577469 82 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 MIR3160-1-201ENST00000577972 85 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 RN7SL622P-201ENST00000585292 275 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC125494.3-201ENST00000602759 455 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA13P31271 AL391834.2-201ENST00000609982 546 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 AC096586.1-201ENST00000610267 561 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA13P31271 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXA13P31271 AC140113.4-201ENST00000622087 222 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA13P31271 AL356118.1-201ENST00000635272 1078 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 U6.107-201ENST00000637108 79 ntBASIC4.86□□□□□ -1.63
HOXA13P31271 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXA13P31271 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA13P31271 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA13P31271 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HOXA13P31271 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA13P31271 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HOXA13P31271 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA13P31271 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA13P31271 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXA13P31271 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXA13P31271 RNU1-20P-201ENST00000363314 162 ntBASIC4.85□□□□□ -1.63
HOXA13P31271 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HOXA13P31271 RNU1-13P-201ENST00000384499 162 ntBASIC4.85□□□□□ -1.63
HOXA13P31271 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA13P31271 AL358176.3-201ENST00000420757 454 ntBASIC4.85□□□□□ -1.63
HOXA13P31271 AC241520.1-201ENST00000422654 1099 ntBASIC4.85□□□□□ -1.63
HOXA13P31271 EIF1P3-201ENST00000423841 334 ntBASIC4.85□□□□□ -1.63
HOXA13P31271 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA13P31271 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA13P31271 RPL7L1P1-201ENST00000448259 785 ntBASIC4.85□□□□□ -1.63
HOXA13P31271 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms