Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MIR432-201ENST00000606207 94 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC011374.2-201ENST00000607135 526 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC099669.2-201ENST00000616549 437 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN6P29350 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC007546.1-201ENST00000619452 559 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AP005019.3-201ENST00000620418 560 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PTPN6P29350 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PTPN6P29350 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTPN6P29350 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PTPN6P29350 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN6P29350 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 RNU6-650P-201ENST00000365658 111 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 RNU6-98P-201ENST00000384173 107 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 MIR93-201ENST00000385024 80 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AL121834.1-202ENST00000404494 277 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 RNA5SP239-201ENST00000410218 129 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 ELOCP19-201ENST00000411919 318 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 VTA1P1-201ENST00000414044 866 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 COX6CP17-201ENST00000421389 185 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 RPL7AP25-201ENST00000423357 805 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 RPS12P10-201ENST00000427031 377 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 EIF2S2P3-201ENST00000428356 999 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 ELOCP6-201ENST00000429066 328 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AC016712.1-201ENST00000431088 378 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN6P29350 TPT1P12-201ENST00000448968 492 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN6P29350 ELOCP12-201ENST00000458706 328 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 RPS27AP17-201ENST00000463344 455 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AC053481.1-201ENST00000467217 306 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 RPL23AP73-201ENST00000492507 471 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN6P29350 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN6P29350 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTPN6P29350 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.13□□□□□ -1.75
PTPN6P29350 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN6P29350 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 AP003117.1-201ENST00000602771 554 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 AC245389.2-201ENST00000616023 576 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AC243756.2-201ENST00000618406 463 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AC242843.1-201ENST00000618702 573 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 AP006248.3-201ENST00000623580 594 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 LINC01808-202ENST00000641680 1116 ntBASIC4.13□□□□□ -1.75
PTPN6P29350 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN6P29350 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PTPN6P29350 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PTPN6P29350 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTPN6P29350 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN6P29350 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PTPN6P29350 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN6P29350 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTPN6P29350 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN6P29350 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
PTPN6P29350 MTND5P11-201ENST00000511037 1812 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.12□□□□□ -1.75
PTPN6P29350 SNORA62-201ENST00000365493 153 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTPN6P29350 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN6P29350 UBE2V1P11-201ENST00000411559 285 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 RPS20P14-201ENST00000412545 360 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN6P29350 RPS23P10-201ENST00000416185 486 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 RPS12P23-201ENST00000419579 400 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 AL121882.1-201ENST00000422893 417 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.12□□□□□ -1.75
PTPN6P29350 MTATP6P11-201ENST00000428071 670 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 AC105402.2-201ENST00000438503 358 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.12□□□□□ -1.75
PTPN6P29350 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.12□□□□□ -1.75
PTPN6P29350 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN6P29350 AC012170.1-201ENST00000495139 359 ntBASIC4.12□□□□□ -1.75
PTPN6P29350 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN6P29350 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN6P29350 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms