Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 HSPA8P14-201ENST00000552265 1805 ntBASIC6.87□□□□□ -1.31
RFX1P22670 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.86□□□□□ -1.31
RFX1P22670 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.86□□□□□ -1.31
RFX1P22670 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RFX1P22670 SNORD56.2-201ENST00000363242 71 ntBASIC6.86□□□□□ -1.31
RFX1P22670 Y_RNA.159-201ENST00000363674 87 ntBASIC6.86□□□□□ -1.31
RFX1P22670 RN7SKP275-201ENST00000364626 301 ntBASIC6.86□□□□□ -1.31
RFX1P22670 Y_RNA.279-201ENST00000364763 95 ntBASIC6.86□□□□□ -1.31
RFX1P22670 RNU1-39P-201ENST00000383897 165 ntBASIC6.86□□□□□ -1.31
RFX1P22670 BTBD10P2-201ENST00000404779 676 ntBASIC6.86□□□□□ -1.31
RFX1P22670 RNU6-908P-201ENST00000410160 94 ntBASIC6.86□□□□□ -1.31
RFX1P22670 RNA5SP118-201ENST00000410385 109 ntBASIC6.86□□□□□ -1.31
RFX1P22670 RN7SKP281-201ENST00000410472 352 ntBASIC6.86□□□□□ -1.31
RFX1P22670 AC078974.1-201ENST00000411597 223 ntBASIC6.86□□□□□ -1.31
RFX1P22670 HMGN1P20-201ENST00000411849 300 ntBASIC6.86□□□□□ -1.31
RFX1P22670 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.86□□□□□ -1.31
RFX1P22670 RPL6P29-201ENST00000414863 865 ntBASIC6.86□□□□□ -1.31
RFX1P22670 NUP35P2-201ENST00000416748 943 ntBASIC6.86□□□□□ -1.31
RFX1P22670 RPS17P17-201ENST00000419392 409 ntBASIC6.86□□□□□ -1.31
RFX1P22670 OR10T1P-201ENST00000424327 947 ntBASIC6.86□□□□□ -1.31
RFX1P22670 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.86□□□□□ -1.31
RFX1P22670 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.86□□□□□ -1.31
RFX1P22670 FTLP19-201ENST00000433300 394 ntBASIC6.86□□□□□ -1.31
RFX1P22670 HMGB3P12-201ENST00000438745 556 ntBASIC6.86□□□□□ -1.31
RFX1P22670 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 AC114728.1-201ENST00000488289 483 ntBASIC6.86□□□□□ -1.31
RFX1P22670 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.86□□□□□ -1.31
RFX1P22670 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.86□□□□□ -1.31
RFX1P22670 AC018645.1-201ENST00000505003 109 ntBASIC6.86□□□□□ -1.31
RFX1P22670 IGHV4-55-201ENST00000520889 368 ntBASIC6.86□□□□□ -1.31
RFX1P22670 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 CENPUP1-201ENST00000526649 1202 ntBASIC6.86□□□□□ -1.31
RFX1P22670 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.86□□□□□ -1.31
RFX1P22670 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.86□□□□□ -1.31
RFX1P22670 OR4H6P-201ENST00000563771 921 ntBASIC6.86□□□□□ -1.31
RFX1P22670 AL138976.2-201ENST00000563989 694 ntBASIC6.86□□□□□ -1.31
RFX1P22670 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 AC011445.2-201ENST00000599274 173 ntBASIC6.86□□□□□ -1.31
RFX1P22670 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.86□□□□□ -1.31
RFX1P22670 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.86□□□□□ -1.31
RFX1P22670 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.86□□□□□ -1.31
RFX1P22670 AC093788.1-201ENST00000609356 927 ntBASIC6.86□□□□□ -1.31
RFX1P22670 MIR6811-201ENST00000620409 58 ntBASIC6.86□□□□□ -1.31
RFX1P22670 AC010338.1-201ENST00000621823 717 ntBASIC6.86□□□□□ -1.31
RFX1P22670 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 AC083843.2-201ENST00000568248 6253 ntBASIC6.86□□□□□ -1.31
RFX1P22670 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RFX1P22670 SAGE4P-201ENST00000442271 3381 ntBASIC6.86□□□□□ -1.31
RFX1P22670 MTCO1P11-201ENST00000429111 1528 ntBASIC6.86□□□□□ -1.31
RFX1P22670 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
RFX1P22670 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.85□□□□□ -1.31
RFX1P22670 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.85□□□□□ -1.31
RFX1P22670 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RFX1P22670 RNA5SP394-201ENST00000364216 119 ntBASIC6.85□□□□□ -1.31
RFX1P22670 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.85□□□□□ -1.31
RFX1P22670 snosnR66.1-201ENST00000391095 99 ntBASIC6.85□□□□□ -1.31
RFX1P22670 SLC35E1P1-201ENST00000419313 864 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AL353193.1-201ENST00000421444 268 ntBASIC6.85□□□□□ -1.31
RFX1P22670 COX6CP15-201ENST00000426313 211 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 AC079922.1-201ENST00000443291 359 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC092967.1-201ENST00000449016 481 ntBASIC6.85□□□□□ -1.31
RFX1P22670 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 APOOP2-201ENST00000461561 539 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.85□□□□□ -1.31
RFX1P22670 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 AC010343.2-201ENST00000510162 224 ntBASIC6.85□□□□□ -1.31
RFX1P22670 GAPDHP62-201ENST00000515313 990 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RFX1P22670 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.85□□□□□ -1.31
RFX1P22670 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.85□□□□□ -1.31
RFX1P22670 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.85□□□□□ -1.31
RFX1P22670 AC053481.3-201ENST00000577881 843 ntBASIC6.85□□□□□ -1.31
RFX1P22670 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 AC124916.2-201ENST00000604416 224 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC007621.1-201ENST00000604544 437 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AL035413.2-201ENST00000604801 525 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms