Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC104964.2-201ENST00000562242 4641 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 THAP12P4-201ENST00000528321 2266 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 Y_RNA.26-201ENST00000362539 101 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 RNU6-740P-201ENST00000364734 105 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 RNU6-278P-201ENST00000390945 109 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.24□□□□□ -1.25
COL9A1P20849 AL590632.1-201ENST00000424289 371 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.24□□□□□ -1.25
COL9A1P20849 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC7.24□□□□□ -1.25
COL9A1P20849 C4BPAP2-201ENST00000428434 478 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 FTH1P1-201ENST00000437933 532 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 RPS15AP27-201ENST00000449183 343 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 NDUFB1P2-201ENST00000449477 176 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC116533.1-201ENST00000459748 321 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 RPL9P32-201ENST00000464118 620 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC006967.1-201ENST00000467608 589 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC087879.1-201ENST00000474343 374 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC021382.1-201ENST00000483523 359 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AP002812.1-201ENST00000495378 474 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC068305.1-201ENST00000497406 726 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 FTH1P8-201ENST00000498161 514 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 RNU6-570P-201ENST00000517051 105 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.24□□□□□ -1.25
COL9A1P20849 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC106782.4-201ENST00000568264 210 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.24□□□□□ -1.25
COL9A1P20849 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC130454.1-201ENST00000622948 401 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC091925.2-201ENST00000625059 256 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 AF121897.1-201ENST00000411867 3980 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC016582.1-202ENST00000636341 2982 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 BDP1P-201ENST00000582658 1990 ntBASIC7.24□□□□□ -1.25
COL9A1P20849 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.24□□□□□ -1.25
COL9A1P20849 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.24□□□□□ -1.25
COL9A1P20849 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.24□□□□□ -1.25
COL9A1P20849 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.23□□□□□ -1.25
COL9A1P20849 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 AC008669.1-201ENST00000565823 2178 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.23□□□□□ -1.25
COL9A1P20849 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7.23□□□□□ -1.25
COL9A1P20849 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL9A1P20849 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.23□□□□□ -1.25
COL9A1P20849 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.23□□□□□ -1.25
COL9A1P20849 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 PPIAP22-201ENST00000358455 498 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 RNU6-806P-201ENST00000365147 105 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL9A1P20849 RNU6-1027P-201ENST00000383998 107 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 Y_RNA.576-201ENST00000384781 102 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 MIR649-201ENST00000384843 97 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 MIR19A-201ENST00000384878 82 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 MIR152-201ENST00000385212 87 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
COL9A1P20849 SNORD58.1-201ENST00000391313 66 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AC097374.1-203ENST00000400783 485 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 BX682237.1-201ENST00000415016 335 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.23□□□□□ -1.25
COL9A1P20849 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.23□□□□□ -1.25
COL9A1P20849 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.23□□□□□ -1.25
COL9A1P20849 USP9YP30-201ENST00000430729 455 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 GAPDHP58-201ENST00000438477 1006 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.23□□□□□ -1.25
COL9A1P20849 RPL5P7-201ENST00000444235 813 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AL163193.1-201ENST00000444895 788 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AL139109.1-201ENST00000455491 297 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AC104472.2-201ENST00000469035 601 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AL355032.1-201ENST00000472981 438 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 RPL7AP10-201ENST00000481016 791 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AC231760.1-201ENST00000498002 260 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.23□□□□□ -1.25
COL9A1P20849 SNORA74.1-201ENST00000516320 180 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 RNU6-1069P-201ENST00000516612 133 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC7.23□□□□□ -1.25
COL9A1P20849 IGLVI-42-201ENST00000522485 381 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 IGKV2-18-201ENST00000522607 343 ntBASIC7.23□□□□□ -1.25
COL9A1P20849 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms