Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 USP9YP31-201ENST00000431405 881 ntBASIC6.22□□□□□ -1.41
CFTRP13569 U3.44-201ENST00000458938 192 ntBASIC6.22□□□□□ -1.41
CFTRP13569 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CFTRP13569 CYP4A43P-201ENST00000568156 121 ntBASIC6.22□□□□□ -1.41
CFTRP13569 AL606834.2-201ENST00000602954 668 ntBASIC6.22□□□□□ -1.41
CFTRP13569 MTCO3P22-201ENST00000603219 784 ntBASIC6.22□□□□□ -1.41
CFTRP13569 AP000255.1-201ENST00000610276 676 ntBASIC6.22□□□□□ -1.41
CFTRP13569 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.21□□□□□ -1.41
CFTRP13569 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CFTRP13569 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
CFTRP13569 MAPK10-253ENST00000641010 4072 ntBASIC6.21□□□□□ -1.41
CFTRP13569 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CFTRP13569 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CFTRP13569 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CFTRP13569 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CFTRP13569 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CFTRP13569 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.21□□□□□ -1.42
CFTRP13569 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CFTRP13569 AC093719.1-202ENST00000392735 373 ntBASIC6.21□□□□□ -1.42
CFTRP13569 HLA-N-201ENST00000437516 135 ntBASIC6.21□□□□□ -1.42
CFTRP13569 AL671855.1-201ENST00000446875 1203 ntBASIC6.21□□□□□ -1.42
CFTRP13569 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.21□□□□□ -1.42
CFTRP13569 S100A11P2-201ENST00000467589 312 ntBASIC6.21□□□□□ -1.42
CFTRP13569 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.21□□□□□ -1.42
CFTRP13569 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.21□□□□□ -1.42
CFTRP13569 AC011611.1-201ENST00000552179 197 ntBASIC6.21□□□□□ -1.42
CFTRP13569 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.21□□□□□ -1.42
CFTRP13569 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.21□□□□□ -1.42
CFTRP13569 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CFTRP13569 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 OR10J6P-201ENST00000289731 930 ntBASIC6.2□□□□□ -1.42
CFTRP13569 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.2□□□□□ -1.42
CFTRP13569 TPT1P1-201ENST00000458495 518 ntBASIC6.2□□□□□ -1.42
CFTRP13569 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.2□□□□□ -1.42
CFTRP13569 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.2□□□□□ -1.42
CFTRP13569 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.2□□□□□ -1.42
CFTRP13569 MIR5680-201ENST00000577577 84 ntBASIC6.2□□□□□ -1.42
CFTRP13569 MIR3936-201ENST00000584304 110 ntBASIC6.2□□□□□ -1.42
CFTRP13569 AL354976.1-201ENST00000613843 387 ntBASIC6.2□□□□□ -1.42
CFTRP13569 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CFTRP13569 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CFTRP13569 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CFTRP13569 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CFTRP13569 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CFTRP13569 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CFTRP13569 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.19□□□□□ -1.42
CFTRP13569 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.19□□□□□ -1.42
CFTRP13569 AL831737.1-201ENST00000441288 271 ntBASIC6.19□□□□□ -1.42
CFTRP13569 AC005008.1-201ENST00000456151 612 ntBASIC6.19□□□□□ -1.42
CFTRP13569 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.19□□□□□ -1.42
CFTRP13569 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.19□□□□□ -1.42
CFTRP13569 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.19□□□□□ -1.42
CFTRP13569 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.19□□□□□ -1.42
CFTRP13569 AC138965.3-201ENST00000623875 498 ntBASIC6.19□□□□□ -1.42
CFTRP13569 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC6.19□□□□□ -1.42
CFTRP13569 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.19□□□□□ -1.42
CFTRP13569 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 AC093535.2-201ENST00000624769 2326 ntBASIC6.19□□□□□ -1.42
CFTRP13569 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CFTRP13569 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CFTRP13569 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CFTRP13569 AC083837.1-201ENST00000565297 2994 ntBASIC6.18□□□□□ -1.42
CFTRP13569 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CFTRP13569 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CFTRP13569 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.18□□□□□ -1.42
CFTRP13569 AL034403.1-201ENST00000399414 885 ntBASIC6.18□□□□□ -1.42
CFTRP13569 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.18□□□□□ -1.42
CFTRP13569 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.18□□□□□ -1.42
CFTRP13569 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.18□□□□□ -1.42
CFTRP13569 AC022146.1-201ENST00000595307 847 ntBASIC6.18□□□□□ -1.42
CFTRP13569 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.18□□□□□ -1.42
CFTRP13569 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CFTRP13569 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CFTRP13569 AP001992.1-205ENST00000462248 379 ntBASIC6.17□□□□□ -1.42
CFTRP13569 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CFTRP13569 HMGB3P13-201ENST00000511263 607 ntBASIC6.17□□□□□ -1.42
CFTRP13569 PTGES3P3-201ENST00000511479 482 ntBASIC6.17□□□□□ -1.42
CFTRP13569 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.17□□□□□ -1.42
CFTRP13569 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.17□□□□□ -1.42
CFTRP13569 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.17□□□□□ -1.42
CFTRP13569 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.17□□□□□ -1.42
CFTRP13569 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CFTRP13569 MUC2-202ENST00000613187 4845 ntBASIC6.17□□□□□ -1.42
CFTRP13569 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CFTRP13569 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.17□□□□□ -1.42
CFTRP13569 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CFTRP13569 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms