Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HAUS1P3-201ENST00000523909 662 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 MTATP6P15-201ENST00000527233 835 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AC105233.3-201ENST00000531125 744 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC6P09630 MRPS36P5-201ENST00000551909 298 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC6P09630 AC015922.4-201ENST00000612568 690 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AL133370.2-201ENST00000619934 439 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AC093875.1-201ENST00000623688 504 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 AL359715.4-201ENST00000606629 1436 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC6P09630 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC6P09630 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC6P09630 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
HOXC6P09630 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 TCP11X1-202ENST00000622971 1372 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 TTC39DP-201ENST00000416781 1688 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC6P09630 AL583835.1-201ENST00000399570 407 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 RN7SKP235-201ENST00000410662 305 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AL590806.1-201ENST00000415818 853 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 EIF1P3-201ENST00000423841 334 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 MTCO1P43-201ENST00000431831 488 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 RPL7P34-201ENST00000433316 712 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 OR10R1P-201ENST00000441524 1141 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC6P09630 AL157884.3-201ENST00000448273 1184 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC6P09630 TPT1P1-201ENST00000458495 518 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 snoU13.22-201ENST00000459428 104 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC6P09630 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXC6P09630 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC6P09630 ATP1B1P1-201ENST00000509767 915 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 KCTD9P2-201ENST00000512203 1013 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 RNU6-311P-201ENST00000516224 102 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 RNA5SP73-201ENST00000516744 108 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 FTH1P11-201ENST00000517577 551 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AC023632.4-201ENST00000517783 191 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC6P09630 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC6P09630 OR5BC1P-201ENST00000529327 739 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC6P09630 AC053481.4-201ENST00000583164 216 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AP002802.2-201ENST00000605877 235 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
HOXC6P09630 AL021997.2-201ENST00000615674 271 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC6P09630 AL445363.3-201ENST00000623080 671 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 CDC27P2-201ENST00000425026 1922 ntBASIC4.93□□□□□ -1.62
HOXC6P09630 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC6P09630 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC6P09630 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC6P09630 SAMMSON-213ENST00000641336 1521 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 AL672167.1-205ENST00000641112 3080 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC6P09630 RNA5SP130-201ENST00000364431 114 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 AC234772.1-201ENST00000377927 937 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 SNORD116-2-201ENST00000384274 95 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 SNORD116-6-201ENST00000384711 96 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 MIR554-201ENST00000384874 96 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC6P09630 ATF1P1-201ENST00000406040 927 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 RNA5SP44-201ENST00000410446 133 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 AL158825.1-201ENST00000414735 521 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 EIF4A1P1-201ENST00000420241 934 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 AC093422.3-201ENST00000428506 305 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 COX6B1P7-201ENST00000430845 235 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 RPS7P2-201ENST00000435134 607 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 AL031584.1-201ENST00000447169 754 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 AL162151.2-201ENST00000448875 158 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC6P09630 CCRL1P1-201ENST00000449542 1053 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 Z99714.1-201ENST00000450463 807 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 AC108751.2-201ENST00000469993 231 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms