Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPL5P32-201ENST00000454085 879 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AC007537.2-201ENST00000472093 511 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM1P09493 AC008638.1-201ENST00000506035 866 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM1P09493 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM1P09493 AC022790.1-201ENST00000522872 204 ntBASIC4.35□□□□□ -1.71
TPM1P09493 OR7E10P-201ENST00000526420 991 ntBASIC4.35□□□□□ -1.71
TPM1P09493 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM1P09493 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM1P09493 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM1P09493 AC011477.5-201ENST00000586571 259 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM1P09493 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM1P09493 AL161729.3-201ENST00000603533 673 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AC010680.4-201ENST00000605334 543 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AL391834.1-201ENST00000609609 560 ntBASIC4.35□□□□□ -1.71
TPM1P09493 AL049539.1-201ENST00000611964 459 ntBASIC4.35□□□□□ -1.71
TPM1P09493 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM1P09493 CR381670.1-201ENST00000624291 1693 ntBASIC4.35□□□□□ -1.71
TPM1P09493 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM1P09493 AL021368.2-201ENST00000606125 5352 ntBASIC4.35□□□□□ -1.71
TPM1P09493 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TPM1P09493 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TPM1P09493 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TPM1P09493 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM1P09493 HLFP1-201ENST00000402375 499 ntBASIC4.34□□□□□ -1.71
TPM1P09493 HMGB3P19-201ENST00000403971 560 ntBASIC4.34□□□□□ -1.71
TPM1P09493 AC013404.1-201ENST00000413068 249 ntBASIC4.34□□□□□ -1.71
TPM1P09493 OR5BE1P-201ENST00000425977 939 ntBASIC4.34□□□□□ -1.71
TPM1P09493 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM1P09493 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM1P09493 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM1P09493 ANP32BP2-201ENST00000454525 545 ntBASIC4.34□□□□□ -1.71
TPM1P09493 OR2AF1P-201ENST00000454899 889 ntBASIC4.34□□□□□ -1.71
TPM1P09493 RNU7-170P-201ENST00000459303 61 ntBASIC4.34□□□□□ -1.71
TPM1P09493 AC006511.1-201ENST00000470614 315 ntBASIC4.34□□□□□ -1.71
TPM1P09493 RN7SL481P-201ENST00000477764 299 ntBASIC4.34□□□□□ -1.71
TPM1P09493 RN7SL604P-201ENST00000492589 296 ntBASIC4.34□□□□□ -1.71
TPM1P09493 RNU6-1231P-201ENST00000517185 103 ntBASIC4.34□□□□□ -1.71
TPM1P09493 OR8G5-201ENST00000524943 1041 ntBASIC4.34□□□□□ -1.71
TPM1P09493 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM1P09493 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TPM1P09493 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM1P09493 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.34□□□□□ -1.71
TPM1P09493 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM1P09493 AC005191.1-201ENST00000603950 358 ntBASIC4.34□□□□□ -1.71
TPM1P09493 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TPM1P09493 AC243654.2-201ENST00000612843 443 ntBASIC4.34□□□□□ -1.71
TPM1P09493 OR5BE1P-202ENST00000641168 1176 ntBASIC4.34□□□□□ -1.71
TPM1P09493 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TPM1P09493 AL132640.2-201ENST00000559968 1698 ntBASIC4.34□□□□□ -1.71
TPM1P09493 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM1P09493 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
TPM1P09493 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.34□□□□□ -1.72
TPM1P09493 AC006504.1-201ENST00000562493 3666 ntBASIC4.34□□□□□ -1.72
TPM1P09493 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TPM1P09493 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TPM1P09493 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TPM1P09493 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM1P09493 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TPM1P09493 AL590762.4-201ENST00000425885 253 ntBASIC4.33□□□□□ -1.72
TPM1P09493 AC006455.6-201ENST00000426192 893 ntBASIC4.33□□□□□ -1.72
TPM1P09493 SKP1P1-201ENST00000438081 489 ntBASIC4.33□□□□□ -1.72
TPM1P09493 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM1P09493 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM1P09493 AC098824.1-201ENST00000453565 980 ntBASIC4.33□□□□□ -1.72
TPM1P09493 SNRPGP5-201ENST00000456003 220 ntBASIC4.33□□□□□ -1.72
TPM1P09493 RNU7-27P-201ENST00000459281 62 ntBASIC4.33□□□□□ -1.72
TPM1P09493 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM1P09493 CCNHP1-201ENST00000513311 678 ntBASIC4.33□□□□□ -1.72
TPM1P09493 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TPM1P09493 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM1P09493 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM1P09493 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM1P09493 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM1P09493 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM1P09493 AC099489.2-201ENST00000574976 260 ntBASIC4.33□□□□□ -1.72
TPM1P09493 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM1P09493 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM1P09493 AC067852.4-201ENST00000590314 478 ntBASIC4.33□□□□□ -1.72
TPM1P09493 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM1P09493 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TPM1P09493 SAGE2P-201ENST00000420011 2126 ntBASIC4.33□□□□□ -1.72
TPM1P09493 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 AC138393.1-206ENST00000540997 1886 ntBASIC4.32□□□□□ -1.72
TPM1P09493 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TPM1P09493 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM1P09493 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 RNU1-132P-201ENST00000364300 164 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms