Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RETP07949 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RETP07949 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.25□□□□□ -1.73
RETP07949 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RETP07949 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.24□□□□□ -1.73
RETP07949 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.24□□□□□ -1.73
RETP07949 AC022022.1-201ENST00000430304 178 ntBASIC4.24□□□□□ -1.73
RETP07949 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.24□□□□□ -1.73
RETP07949 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 DDX39BP2-208ENST00000453923 258 ntBASIC4.24□□□□□ -1.73
RETP07949 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.24□□□□□ -1.73
RETP07949 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.24□□□□□ -1.73
RETP07949 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 CCNHP1-201ENST00000513311 678 ntBASIC4.24□□□□□ -1.73
RETP07949 RNA5SP73-201ENST00000516744 108 ntBASIC4.24□□□□□ -1.73
RETP07949 SNORA70.24-201ENST00000517233 118 ntBASIC4.24□□□□□ -1.73
RETP07949 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.24□□□□□ -1.73
RETP07949 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.24□□□□□ -1.73
RETP07949 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.24□□□□□ -1.73
RETP07949 CCNG2P1-201ENST00000549521 1000 ntBASIC4.24□□□□□ -1.73
RETP07949 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.24□□□□□ -1.73
RETP07949 RPL23AP97-201ENST00000568955 471 ntBASIC4.24□□□□□ -1.73
RETP07949 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.24□□□□□ -1.73
RETP07949 MTND2P13-201ENST00000577438 1039 ntBASIC4.24□□□□□ -1.73
RETP07949 AC009303.3-201ENST00000591103 736 ntBASIC4.24□□□□□ -1.73
RETP07949 AC005255.1-201ENST00000593748 216 ntBASIC4.24□□□□□ -1.73
RETP07949 AC010680.3-201ENST00000604215 520 ntBASIC4.24□□□□□ -1.73
RETP07949 AC243756.2-201ENST00000618406 463 ntBASIC4.24□□□□□ -1.73
RETP07949 AL445363.3-201ENST00000623080 671 ntBASIC4.24□□□□□ -1.73
RETP07949 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.24□□□□□ -1.73
RETP07949 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 AC139769.1-204ENST00000472297 1931 ntBASIC4.24□□□□□ -1.73
RETP07949 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RETP07949 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
RETP07949 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RETP07949 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RETP07949 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
RETP07949 AC009313.2-201ENST00000417893 1941 ntBASIC4.23□□□□□ -1.73
RETP07949 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
RETP07949 SYT14P1-202ENST00000600441 1448 ntBASIC4.23□□□□□ -1.73
RETP07949 AC016588.2-201ENST00000632484 3021 ntBASIC4.23□□□□□ -1.73
RETP07949 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
RETP07949 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RETP07949 XIAPP3-201ENST00000312918 795 ntBASIC4.23□□□□□ -1.73
RETP07949 SNORA73.2-201ENST00000364946 201 ntBASIC4.23□□□□□ -1.73
RETP07949 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RETP07949 MIR93-201ENST00000385024 80 ntBASIC4.23□□□□□ -1.73
RETP07949 RAB9AP3-201ENST00000412737 573 ntBASIC4.23□□□□□ -1.73
RETP07949 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
RETP07949 RAB9AP1-201ENST00000449393 573 ntBASIC4.23□□□□□ -1.73
RETP07949 OR6C72P-201ENST00000451403 892 ntBASIC4.23□□□□□ -1.73
RETP07949 AC105918.1-201ENST00000474399 838 ntBASIC4.23□□□□□ -1.73
RETP07949 ACTR3P3-201ENST00000480448 893 ntBASIC4.23□□□□□ -1.73
RETP07949 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
RETP07949 IGHV3-32-201ENST00000519182 355 ntBASIC4.23□□□□□ -1.73
RETP07949 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.23□□□□□ -1.73
RETP07949 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.23□□□□□ -1.73
RETP07949 OR5M7P-201ENST00000526140 972 ntBASIC4.23□□□□□ -1.73
RETP07949 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.23□□□□□ -1.73
RETP07949 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.23□□□□□ -1.73
RETP07949 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.23□□□□□ -1.73
RETP07949 VN1R79P-201ENST00000593540 513 ntBASIC4.23□□□□□ -1.73
RETP07949 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RETP07949 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.23□□□□□ -1.73
RETP07949 AL031666.3-201ENST00000609320 1006 ntBASIC4.23□□□□□ -1.73
RETP07949 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RETP07949 AC096577.2-201ENST00000611455 153 ntBASIC4.23□□□□□ -1.73
RETP07949 AL121772.2-201ENST00000614331 297 ntBASIC4.23□□□□□ -1.73
RETP07949 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.23□□□□□ -1.73
RETP07949 AL391261.4-201ENST00000616012 481 ntBASIC4.23□□□□□ -1.73
RETP07949 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.23□□□□□ -1.73
RETP07949 AC005858.4-201ENST00000623191 700 ntBASIC4.23□□□□□ -1.73
RETP07949 AC007546.2-201ENST00000623996 360 ntBASIC4.23□□□□□ -1.73
RETP07949 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.23□□□□□ -1.73
RETP07949 CASC19-261ENST00000641853 1638 ntBASIC4.23□□□□□ -1.73
RETP07949 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.23□□□□□ -1.73
RETP07949 AC027290.2-201ENST00000623210 18662 ntBASIC4.23□□□□□ -1.73
RETP07949 AL031985.3-201ENST00000565390 2449 ntBASIC4.23□□□□□ -1.73
RETP07949 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RETP07949 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RETP07949 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RETP07949 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RETP07949 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RETP07949 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RETP07949 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RETP07949 RNA5SP124-201ENST00000362739 110 ntBASIC4.22□□□□□ -1.73
RETP07949 RHOT1P2-201ENST00000366423 333 ntBASIC4.22□□□□□ -1.73
RETP07949 MIR34B-201ENST00000385076 84 ntBASIC4.22□□□□□ -1.73
RETP07949 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RETP07949 RNU11-4P-201ENST00000391149 133 ntBASIC4.22□□□□□ -1.73
RETP07949 AL583835.1-201ENST00000399570 407 ntBASIC4.22□□□□□ -1.73
RETP07949 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
RETP07949 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RETP07949 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.22□□□□□ -1.73
RETP07949 EIF1P3-201ENST00000423841 334 ntBASIC4.22□□□□□ -1.73
RETP07949 AC093698.1-201ENST00000423843 571 ntBASIC4.22□□□□□ -1.73
RETP07949 AC115285.1-201ENST00000424879 736 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms