Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDLRP01130 OR52B1P-201ENST00000316506 909 ntBASIC4.51□□□□□ -1.69
LDLRP01130 IGKV7-3-201ENST00000357453 298 ntBASIC4.51□□□□□ -1.69
LDLRP01130 RNA5SP388-201ENST00000362584 119 ntBASIC4.51□□□□□ -1.69
LDLRP01130 SNORD65C-201ENST00000390962 71 ntBASIC4.51□□□□□ -1.69
LDLRP01130 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDLRP01130 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 AC048351.1-201ENST00000420064 602 ntBASIC4.51□□□□□ -1.69
LDLRP01130 CENPIP1-201ENST00000425713 902 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 AL451139.1-201ENST00000434718 346 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC073143.1-201ENST00000436316 395 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 RPL7P29-201ENST00000437151 728 ntBASIC4.51□□□□□ -1.69
LDLRP01130 ELOCP10-201ENST00000440624 327 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 AL122001.1-201ENST00000457027 370 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 PPIAP21-201ENST00000464473 501 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC021146.5-201ENST00000503544 545 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.51□□□□□ -1.69
LDLRP01130 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LDLRP01130 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.51□□□□□ -1.69
LDLRP01130 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 RN7SL690P-201ENST00000582087 240 ntBASIC4.51□□□□□ -1.69
LDLRP01130 MIR4715-201ENST00000584117 79 ntBASIC4.51□□□□□ -1.69
LDLRP01130 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.51□□□□□ -1.69
LDLRP01130 SLC25A36P1-201ENST00000590111 465 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.51□□□□□ -1.69
LDLRP01130 AC025165.5-201ENST00000602802 578 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 ELOCP34-201ENST00000604436 327 ntBASIC4.51□□□□□ -1.69
LDLRP01130 Z82195.1-201ENST00000604558 398 ntBASIC4.51□□□□□ -1.69
LDLRP01130 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.51□□□□□ -1.69
LDLRP01130 FRG1HP-204ENST00000617940 757 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 OR52H1-202ENST00000641796 1061 ntBASIC4.51□□□□□ -1.69
LDLRP01130 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.51□□□□□ -1.69
LDLRP01130 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDLRP01130 SAMMSON-226ENST00000642089 1582 ntBASIC4.51□□□□□ -1.69
LDLRP01130 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDLRP01130 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
LDLRP01130 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDLRP01130 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 AC012321.1-201ENST00000561622 1588 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AC017104.4-201ENST00000636283 1592 ntBASIC4.5□□□□□ -1.69
LDLRP01130 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LDLRP01130 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
LDLRP01130 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 RNU6-543P-201ENST00000362576 108 ntBASIC4.5□□□□□ -1.69
LDLRP01130 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 RNU6-98P-201ENST00000384173 107 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.5□□□□□ -1.69
LDLRP01130 AC106883.1-201ENST00000418805 562 ntBASIC4.5□□□□□ -1.69
LDLRP01130 OR2X1P-201ENST00000421144 687 ntBASIC4.5□□□□□ -1.69
LDLRP01130 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AC234779.1-201ENST00000425910 285 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AC092634.2-201ENST00000428146 1010 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.5□□□□□ -1.69
LDLRP01130 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.5□□□□□ -1.69
LDLRP01130 RRM2P4-201ENST00000441721 562 ntBASIC4.5□□□□□ -1.69
LDLRP01130 OR7E125P-201ENST00000443450 846 ntBASIC4.5□□□□□ -1.69
LDLRP01130 ELOCP13-201ENST00000443934 329 ntBASIC4.5□□□□□ -1.69
LDLRP01130 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.5□□□□□ -1.69
LDLRP01130 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.5□□□□□ -1.69
LDLRP01130 MRPS33P2-201ENST00000507850 322 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.5□□□□□ -1.69
LDLRP01130 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.5□□□□□ -1.69
LDLRP01130 AC091515.1-201ENST00000548110 679 ntBASIC4.5□□□□□ -1.69
LDLRP01130 POLR2KP1-201ENST00000553226 168 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.5□□□□□ -1.69
LDLRP01130 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.5□□□□□ -1.69
LDLRP01130 AC090515.3-201ENST00000560431 315 ntBASIC4.5□□□□□ -1.69
LDLRP01130 ATP5F1P7-201ENST00000567330 760 ntBASIC4.5□□□□□ -1.69
LDLRP01130 MIR4509-3-201ENST00000578671 94 ntBASIC4.5□□□□□ -1.69
LDLRP01130 MIR4509-2-201ENST00000583920 94 ntBASIC4.5□□□□□ -1.69
LDLRP01130 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.5□□□□□ -1.69
LDLRP01130 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.5□□□□□ -1.69
LDLRP01130 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.5□□□□□ -1.69
LDLRP01130 AC098935.2-201ENST00000604222 466 ntBASIC4.5□□□□□ -1.69
LDLRP01130 MLECP1-201ENST00000615893 709 ntBASIC4.5□□□□□ -1.69
LDLRP01130 MIR4509-1-201ENST00000618224 94 ntBASIC4.5□□□□□ -1.69
LDLRP01130 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.5□□□□□ -1.69
LDLRP01130 AC015726.3-201ENST00000624501 418 ntBASIC4.5□□□□□ -1.69
LDLRP01130 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.5□□□□□ -1.69
LDLRP01130 U6.107-201ENST00000637108 79 ntBASIC4.5□□□□□ -1.69
LDLRP01130 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.5□□□□□ -1.69
LDLRP01130 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LDLRP01130 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.5□□□□□ -1.69
LDLRP01130 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms