Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLPTM1O96005 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.28□□□□□ -1.72
CLPTM1O96005 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 AL031985.3-201ENST00000565390 2449 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 RNU6-304P-201ENST00000364855 107 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 RNU6-532P-201ENST00000384318 107 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 ANAPC10P1-201ENST00000395991 556 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AL034374.1-201ENST00000406329 351 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 OR51B3P-201ENST00000412287 913 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AL449283.1-202ENST00000418249 604 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 NANOGP5-201ENST00000424456 877 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 RPS17P8-201ENST00000434525 335 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 VN1R54P-201ENST00000435210 1049 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 GSTA7P-201ENST00000438425 448 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
CLPTM1O96005 Z95152.1-201ENST00000453556 656 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AC079804.1-201ENST00000461922 436 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 RPS4XP6-201ENST00000477670 797 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC098862.1-201ENST00000504991 413 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC020699.1-201ENST00000505161 445 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AC093752.1-206ENST00000511823 336 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AP000676.2-201ENST00000529711 301 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AL352979.3-201ENST00000553515 247 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.27□□□□□ -1.73
CLPTM1O96005 AL049839.1-201ENST00000556151 657 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 ZNF971P-201ENST00000562068 1249 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 TVP23CP2-201ENST00000571473 623 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC098935.2-201ENST00000604222 466 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AL049844.2-201ENST00000604280 628 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC018618.2-201ENST00000604770 446 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC073387.2-201ENST00000604797 784 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC009974.1-201ENST00000608881 455 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 AC006963.1-201ENST00000624003 1052 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 AC007529.1-201ENST00000418574 2178 ntBASIC4.27□□□□□ -1.73
CLPTM1O96005 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLPTM1O96005 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
CLPTM1O96005 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 U6.112-201ENST00000384129 70 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 SSR1P2-201ENST00000415208 787 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.26□□□□□ -1.73
CLPTM1O96005 TBCAP2-201ENST00000416175 326 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 OSTCP5-201ENST00000425293 453 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 PRELID3BP10-201ENST00000431957 584 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.26□□□□□ -1.73
CLPTM1O96005 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC112498.1-201ENST00000444401 332 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 MTND2P8-201ENST00000450555 1025 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC098826.2-201ENST00000452011 651 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC021205.1-201ENST00000468797 348 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.26□□□□□ -1.73
CLPTM1O96005 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 EEF1A1P37-201ENST00000522748 715 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AP001922.4-201ENST00000526967 290 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.26□□□□□ -1.73
CLPTM1O96005 GCSHP4-201ENST00000538792 439 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC008033.2-201ENST00000542626 177 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AL109741.3-201ENST00000561748 592 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms