Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZNF602P-201ENST00000405929 924 ntBASIC1.65□□□□□ -2.15
USH2AO75445 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC1.65□□□□□ -2.15
USH2AO75445 RBMY1KP-201ENST00000423480 476 ntBASIC1.65□□□□□ -2.15
USH2AO75445 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 RNA5SP341-201ENST00000516261 117 ntBASIC1.65□□□□□ -2.15
USH2AO75445 MIR4319-201ENST00000577285 85 ntBASIC1.65□□□□□ -2.15
USH2AO75445 RN7SL371P-201ENST00000578099 267 ntBASIC1.65□□□□□ -2.15
USH2AO75445 AC093388.1-201ENST00000609166 430 ntBASIC1.65□□□□□ -2.15
USH2AO75445 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 AC105074.1-201ENST00000623380 3095 ntBASIC1.65□□□□□ -2.15
USH2AO75445 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 RPS23P10-201ENST00000416185 486 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AL139281.1-201ENST00000422120 335 ntBASIC1.64□□□□□ -2.15
USH2AO75445 NDUFB1P1-201ENST00000435191 180 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC008264.1-201ENST00000447612 367 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC1.64□□□□□ -2.15
USH2AO75445 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC1.64□□□□□ -2.15
USH2AO75445 AC007656.2-201ENST00000624902 4547 ntBASIC1.64□□□□□ -2.15
USH2AO75445 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC1.64□□□□□ -2.15
USH2AO75445 DBIP2-201ENST00000419076 262 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.64□□□□□ -2.15
USH2AO75445 SETP5-201ENST00000437270 562 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.64□□□□□ -2.15
USH2AO75445 AC067852.4-201ENST00000590314 478 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC009464.1-201ENST00000615731 469 ntBASIC1.64□□□□□ -2.15
USH2AO75445 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 AC108734.1-201ENST00000439549 399 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC1.64□□□□□ -2.15
USH2AO75445 AC007599.1-201ENST00000568688 1174 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC1.64□□□□□ -2.15
USH2AO75445 AC099063.3-201ENST00000642066 185 ntBASIC1.64□□□□□ -2.15
USH2AO75445 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC1.64□□□□□ -2.15
USH2AO75445 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC1.64□□□□□ -2.15
USH2AO75445 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.64□□□□□ -2.15
USH2AO75445 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.64□□□□□ -2.15
USH2AO75445 TXNP1-201ENST00000441872 371 ntBASIC1.64□□□□□ -2.15
USH2AO75445 SNRPCP3-201ENST00000474888 476 ntBASIC1.64□□□□□ -2.15
USH2AO75445 TRBV12-1-201ENST00000479785 344 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC1.64□□□□□ -2.15
USH2AO75445 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 CKS1BP3-201ENST00000600888 237 ntBASIC1.64□□□□□ -2.15
USH2AO75445 AC103710.3-201ENST00000608157 948 ntBASIC1.64□□□□□ -2.15
USH2AO75445 OR51C1P-201ENST00000608504 942 ntBASIC1.64□□□□□ -2.15
USH2AO75445 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
USH2AO75445 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC1.64□□□□□ -2.15
USH2AO75445 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 OR51C1P-202ENST00000641159 1444 ntBASIC1.64□□□□□ -2.15
USH2AO75445 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH2AO75445 GLS-204ENST00000409428 816 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 U3.44-201ENST00000458938 192 ntBASIC1.63□□□□□ -2.15
USH2AO75445 CCDC75P1-201ENST00000469247 791 ntBASIC1.63□□□□□ -2.15
USH2AO75445 RPS27AP9-201ENST00000477681 438 ntBASIC1.63□□□□□ -2.15
USH2AO75445 RPS4XP18-201ENST00000495480 763 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC1.63□□□□□ -2.15
USH2AO75445 AC091516.1-201ENST00000549191 703 ntBASIC1.63□□□□□ -2.15
USH2AO75445 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms