Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC118469.1-201ENST00000442943 488 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.18□□□□□ -1.74
LMX1BO60663 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 MTND2P4-201ENST00000445034 1004 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.18□□□□□ -1.74
LMX1BO60663 OR1H1P-201ENST00000448731 937 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC009963.2-201ENST00000453431 138 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 NECAP1P2-201ENST00000455668 727 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 RPL7P32-201ENST00000457119 744 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
LMX1BO60663 RPS4XP18-201ENST00000495480 763 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 RN7SL558P-201ENST00000497468 299 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.18□□□□□ -1.74
LMX1BO60663 RNA5SP464-201ENST00000516251 108 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 OR5AK3P-201ENST00000527486 1297 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 TOMM20P2-201ENST00000540082 421 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.18□□□□□ -1.74
LMX1BO60663 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC008126.1-201ENST00000549019 480 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC008015.1-201ENST00000555505 465 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.18□□□□□ -1.74
LMX1BO60663 SS18L2P2-201ENST00000583960 235 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC011453.2-201ENST00000603737 729 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AL391358.1-201ENST00000605342 190 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC010424.2-201ENST00000607594 443 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AC019193.2-201ENST00000610012 634 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 AL603755.1-201ENST00000619504 163 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMX1BO60663 AL445487.1-201ENST00000415694 1580 ntBASIC4.18□□□□□ -1.74
LMX1BO60663 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMX1BO60663 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMX1BO60663 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.18□□□□□ -1.74
LMX1BO60663 AC097461.1-201ENST00000568928 2821 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 MTND4P5-201ENST00000435821 1374 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 AC104260.2-201ENST00000623551 3497 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LMX1BO60663 BMS1P3-201ENST00000372011 932 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 SNORA40.2-201ENST00000390847 128 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 RPL23AP59-201ENST00000399415 461 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 GLULP6-201ENST00000399502 913 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 MIR298-201ENST00000401212 88 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC234781.4-201ENST00000419384 244 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 SEPT2P1-201ENST00000419651 180 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AC011233.1-201ENST00000422812 283 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC007559.1-201ENST00000428736 355 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC096638.2-201ENST00000434965 711 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 RBMY2TP-201ENST00000451162 947 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 RPS27AP8-201ENST00000452665 445 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 AL445433.1-201ENST00000457507 257 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 CYCSP34-201ENST00000458172 304 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 RPL23AP37-201ENST00000479658 549 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC073358.1-201ENST00000505671 684 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 MTCYBP16-201ENST00000509187 1129 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC117532.1-201ENST00000514638 323 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 Y_RNA.719-201ENST00000517156 106 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 HIGD1AP18-201ENST00000520730 278 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC090819.1-201ENST00000523800 1111 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 PDCL2P2-201ENST00000533651 189 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 TVP23CP2-201ENST00000571473 623 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms