Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 AC083806.2-201ENST00000617795 2685 ntBASIC5.08□□□□□ -1.6
PAX4O43316 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 AL080312.1-201ENST00000256654 824 ntBASIC5.08□□□□□ -1.6
PAX4O43316 Y_RNA.54-201ENST00000362766 105 ntBASIC5.08□□□□□ -1.6
PAX4O43316 RNU6-582P-201ENST00000362989 107 ntBASIC5.08□□□□□ -1.6
PAX4O43316 Y_RNA.83-201ENST00000363005 113 ntBASIC5.08□□□□□ -1.6
PAX4O43316 RNA5SP218-201ENST00000363188 109 ntBASIC5.08□□□□□ -1.6
PAX4O43316 Y_RNA.237-201ENST00000364439 102 ntBASIC5.08□□□□□ -1.6
PAX4O43316 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 SNORA70.8-201ENST00000384231 136 ntBASIC5.08□□□□□ -1.6
PAX4O43316 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PAX4O43316 AL359715.1-201ENST00000404330 555 ntBASIC5.08□□□□□ -1.6
PAX4O43316 RN7SKP266-201ENST00000410232 287 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC011933.1-201ENST00000413334 321 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AL136133.1-201ENST00000413694 376 ntBASIC5.08□□□□□ -1.6
PAX4O43316 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX4O43316 PDSS1P1-201ENST00000422953 1114 ntBASIC5.08□□□□□ -1.6
PAX4O43316 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.08□□□□□ -1.6
PAX4O43316 C4BPAP2-201ENST00000428434 478 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC236972.1-201ENST00000433225 199 ntBASIC5.08□□□□□ -1.6
PAX4O43316 PPIAP17-201ENST00000438507 471 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC019185.1-201ENST00000442718 389 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC002486.2-201ENST00000447806 590 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.08□□□□□ -1.6
PAX4O43316 LINC01399-202ENST00000458450 244 ntBASIC5.08□□□□□ -1.6
PAX4O43316 RPL7L1P8-201ENST00000469911 741 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 SUMO2P4-201ENST00000504193 276 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.08□□□□□ -1.6
PAX4O43316 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 RNU4-71P-201ENST00000516258 113 ntBASIC5.08□□□□□ -1.6
PAX4O43316 RNU6-201P-201ENST00000517100 61 ntBASIC5.08□□□□□ -1.6
PAX4O43316 EEF1B2P2-201ENST00000519625 676 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX4O43316 OR5D2P-201ENST00000524390 911 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 AC024405.2-202ENST00000532731 184 ntBASIC5.08□□□□□ -1.6
PAX4O43316 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.08□□□□□ -1.6
PAX4O43316 RPA2P1-201ENST00000556557 721 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC013283.1-201ENST00000557282 492 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC090651.1-201ENST00000567865 634 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC5.08□□□□□ -1.6
PAX4O43316 MIR4643-201ENST00000577473 78 ntBASIC5.08□□□□□ -1.6
PAX4O43316 MIR3135A-201ENST00000578460 77 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AC061975.3-201ENST00000583209 244 ntBASIC5.08□□□□□ -1.6
PAX4O43316 MIR5188-201ENST00000583467 113 ntBASIC5.08□□□□□ -1.6
PAX4O43316 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 AL078605.1-201ENST00000603529 500 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AP001554.1-201ENST00000604533 376 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AL136139.1-201ENST00000605568 222 ntBASIC5.08□□□□□ -1.6
PAX4O43316 MIR6726-201ENST00000613751 61 ntBASIC5.08□□□□□ -1.6
PAX4O43316 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX4O43316 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AL121985.2-201ENST00000621192 555 ntBASIC5.08□□□□□ -1.6
PAX4O43316 AL161637.1-201ENST00000622380 412 ntBASIC5.08□□□□□ -1.6
PAX4O43316 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.08□□□□□ -1.6
PAX4O43316 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.08□□□□□ -1.6
PAX4O43316 U6.104-201ENST00000637979 90 ntBASIC5.08□□□□□ -1.6
PAX4O43316 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX4O43316 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PAX4O43316 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX4O43316 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX4O43316 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
PAX4O43316 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PAX4O43316 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX4O43316 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PAX4O43316 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PAX4O43316 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PAX4O43316 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX4O43316 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX4O43316 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX4O43316 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
PAX4O43316 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX4O43316 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PAX4O43316 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
PAX4O43316 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX4O43316 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX4O43316 RNU6-858P-201ENST00000362436 107 ntBASIC5.07□□□□□ -1.6
PAX4O43316 Y_RNA.39-201ENST00000362620 98 ntBASIC5.07□□□□□ -1.6
PAX4O43316 Y_RNA.367-201ENST00000365544 101 ntBASIC5.07□□□□□ -1.6
PAX4O43316 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX4O43316 RNU6-730P-201ENST00000383954 104 ntBASIC5.07□□□□□ -1.6
PAX4O43316 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PAX4O43316 RPSAP44-201ENST00000406712 884 ntBASIC5.07□□□□□ -1.6
PAX4O43316 SNX18P13-201ENST00000412442 529 ntBASIC5.07□□□□□ -1.6
PAX4O43316 AL590806.1-201ENST00000415818 853 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms