Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUX2O14529 AP001992.1-205ENST00000462248 379 ntBASIC6.61□□□□□ -1.35
CUX2O14529 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.61□□□□□ -1.35
CUX2O14529 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
CUX2O14529 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CUX2O14529 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUX2O14529 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.61□□□□□ -1.35
CUX2O14529 RPL23AP87-202ENST00000573039 466 ntBASIC6.61□□□□□ -1.35
CUX2O14529 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.61□□□□□ -1.35
CUX2O14529 SLC25A36P1-201ENST00000590111 465 ntBASIC6.61□□□□□ -1.35
CUX2O14529 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUX2O14529 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUX2O14529 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
CUX2O14529 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CUX2O14529 NCOA4P2-201ENST00000340589 1813 ntBASIC6.61□□□□□ -1.35
CUX2O14529 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUX2O14529 MTND5P12-201ENST00000502851 1449 ntBASIC6.6□□□□□ -1.35
CUX2O14529 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.6□□□□□ -1.35
CUX2O14529 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.6□□□□□ -1.35
CUX2O14529 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.6□□□□□ -1.35
CUX2O14529 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 AC069240.1-201ENST00000548774 375 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUX2O14529 AL121576.1-201ENST00000556055 276 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AC119674.1-207ENST00000641355 633 ntBASIC6.6□□□□□ -1.35
CUX2O14529 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUX2O14529 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 FAM35BP-202ENST00000497389 3337 ntBASIC6.6□□□□□ -1.35
CUX2O14529 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUX2O14529 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.6□□□□□ -1.35
CUX2O14529 MIR1261-201ENST00000408659 82 ntBASIC6.6□□□□□ -1.35
CUX2O14529 SEPT7P8-201ENST00000413308 775 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AC096644.3-201ENST00000416788 338 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.6□□□□□ -1.35
CUX2O14529 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.6□□□□□ -1.35
CUX2O14529 RPL27AP5-201ENST00000469428 449 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AC100770.1-201ENST00000532310 322 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 NPM1P47-201ENST00000560843 856 ntBASIC6.6□□□□□ -1.35
CUX2O14529 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.6□□□□□ -1.35
CUX2O14529 AL590240.3-201ENST00000621416 943 ntBASIC6.6□□□□□ -1.35
CUX2O14529 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.6□□□□□ -1.35
CUX2O14529 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.59□□□□□ -1.35
CUX2O14529 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUX2O14529 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
CUX2O14529 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.59□□□□□ -1.35
CUX2O14529 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUX2O14529 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUX2O14529 ZNF807-201ENST00000328088 1707 ntBASIC6.59□□□□□ -1.35
CUX2O14529 SNORA48.8-201ENST00000391324 134 ntBASIC6.59□□□□□ -1.36
CUX2O14529 PRELID3BP10-201ENST00000431957 584 ntBASIC6.59□□□□□ -1.36
CUX2O14529 NANOGNBP1-201ENST00000448444 480 ntBASIC6.59□□□□□ -1.36
CUX2O14529 ARL4AP1-201ENST00000503220 705 ntBASIC6.59□□□□□ -1.36
CUX2O14529 AC093755.1-201ENST00000512950 1023 ntBASIC6.59□□□□□ -1.36
CUX2O14529 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CUX2O14529 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.59□□□□□ -1.36
CUX2O14529 MIR5004-201ENST00000579078 107 ntBASIC6.59□□□□□ -1.36
CUX2O14529 AC006077.1-201ENST00000604746 343 ntBASIC6.59□□□□□ -1.36
CUX2O14529 AL451044.1-201ENST00000604867 238 ntBASIC6.59□□□□□ -1.36
CUX2O14529 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.59□□□□□ -1.36
CUX2O14529 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.59□□□□□ -1.36
CUX2O14529 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC6.59□□□□□ -1.36
CUX2O14529 AP005264.7-201ENST00000625003 745 ntBASIC6.59□□□□□ -1.36
CUX2O14529 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CUX2O14529 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUX2O14529 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CUX2O14529 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUX2O14529 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUX2O14529 RPL7P60-201ENST00000397636 735 ntBASIC6.58□□□□□ -1.36
CUX2O14529 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6.58□□□□□ -1.36
CUX2O14529 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.58□□□□□ -1.36
CUX2O14529 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC6.58□□□□□ -1.36
CUX2O14529 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.58□□□□□ -1.36
CUX2O14529 AC008759.1-201ENST00000589783 983 ntBASIC6.58□□□□□ -1.36
CUX2O14529 AC090246.1-201ENST00000616499 426 ntBASIC6.58□□□□□ -1.36
CUX2O14529 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUX2O14529 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.58□□□□□ -1.36
CUX2O14529 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUX2O14529 AP002001.2-201ENST00000529025 1469 ntBASIC6.58□□□□□ -1.36
CUX2O14529 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CUX2O14529 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CUX2O14529 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUX2O14529 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CUX2O14529 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUX2O14529 SNORD35B-201ENST00000363660 87 ntBASIC6.57□□□□□ -1.36
CUX2O14529 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CUX2O14529 SOD2P1-201ENST00000396543 562 ntBASIC6.57□□□□□ -1.36
CUX2O14529 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.57□□□□□ -1.36
CUX2O14529 AC017007.3-201ENST00000479865 435 ntBASIC6.57□□□□□ -1.36
CUX2O14529 AC103843.2-201ENST00000530523 682 ntBASIC6.57□□□□□ -1.36
CUX2O14529 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CUX2O14529 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUX2O14529 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
CUX2O14529 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CUX2O14529 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.56□□□□□ -1.36
CUX2O14529 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms