Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MTCO2P5-201ENST00000422621 426 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 ISCA1P6-201ENST00000427740 390 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 RPL23AP60-201ENST00000450011 454 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC073594.1-201ENST00000462065 364 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC090142.1-201ENST00000465776 462 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 RPL31P50-201ENST00000471002 296 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC092824.1-201ENST00000483524 576 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 MTND1P3-201ENST00000484956 952 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC012170.1-201ENST00000495139 359 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 SNORA58-201ENST00000505219 137 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AL845331.3-202ENST00000562856 261 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 TXNP4-201ENST00000575018 310 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 NF1P5-201ENST00000588287 448 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AL161734.1-201ENST00000609720 557 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 MLECP1-201ENST00000615893 709 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 CLCA3P-203ENST00000490028 2781 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AL713922.1-201ENST00000416477 747 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 COX6CP15-201ENST00000426313 211 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC099677.3-201ENST00000427081 395 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 C4BPAP2-201ENST00000428434 478 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RPEP2-201ENST00000432149 701 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC002486.1-201ENST00000435098 391 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RPS3AP38-201ENST00000435889 763 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RSU1P2-202ENST00000437884 485 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 HSPE1P28-201ENST00000443139 211 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RPS4XP4-201ENST00000443195 763 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RPL17P49-201ENST00000443728 411 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 FABP3P2-201ENST00000453169 399 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AL356981.1-201ENST00000454879 684 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RN7SL385P-201ENST00000468873 276 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 HMGB1P36-201ENST00000487709 576 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC024451.1-201ENST00000508013 779 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC105914.1-201ENST00000511798 226 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RAB9BP1-201ENST00000519581 626 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 MIR7641-1-201ENST00000627518 61 ntBASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
TMEM88BA6NKF7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TMEM88BA6NKF7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms