Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SAMMSON-210ENST00000641260 1308 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC108467.2-201ENST00000617640 1597 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC011933.2-201ENST00000578539 2790 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 SNORD16-201ENST00000362803 99 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RNA5SP429-201ENST00000363688 109 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 Y_RNA.419-201ENST00000384041 102 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RNU6-74P-201ENST00000384235 107 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 MIR187-201ENST00000385062 109 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL034417.1-201ENST00000399343 800 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 EIF5P1-201ENST00000400019 1231 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL122016.1-201ENST00000403365 367 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL162578.1-201ENST00000406202 378 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RNU6-1068P-201ENST00000410958 103 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RAB28P1-201ENST00000411517 641 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC009161.1-201ENST00000417306 376 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 PPIAP23-201ENST00000420099 497 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC019097.1-201ENST00000424783 735 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 OR2B7P-201ENST00000429302 934 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RBMY2QP-201ENST00000429799 1147 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RPL37P1-201ENST00000432310 284 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RPL5P25-201ENST00000441148 775 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 SLAMF6P1-201ENST00000451067 602 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL121877.1-201ENST00000453704 622 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RPS20P32-201ENST00000456044 356 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 Z83838.1-202ENST00000456225 839 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RANP2-201ENST00000456833 229 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AP1S2P1-201ENST00000457344 379 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 MTCO2P29-201ENST00000465212 189 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RPL21P6-201ENST00000479171 504 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC096576.1-201ENST00000489014 359 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RPS4XP18-201ENST00000495480 763 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 GAPDHP56-201ENST00000506031 988 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC093878.1-201ENST00000515630 432 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RNU6-327P-201ENST00000516270 127 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC022861.1-201ENST00000522981 663 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 BNIP3P22-201ENST00000593399 556 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AL360085.1-201ENST00000604713 532 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RMST_7.1-201ENST00000621935 268 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 LINC02495-203ENST00000636704 242 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC100810.6-201ENST00000638068 285 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC107081.3-201ENST00000612715 2034 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.41□□□□□ -1.54
SHISA3A0PJX4 AC005224.3-201ENST00000584683 2140 ntBASIC5.41□□□□□ -1.54
SHISA3A0PJX4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RNU6-223P-201ENST00000362830 107 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RNU4-1-201ENST00000363925 141 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RNU1-85P-201ENST00000364127 164 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RNY1P12-201ENST00000364251 105 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 Y_RNA.381-201ENST00000365666 102 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 MIR649-201ENST00000384843 97 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC078974.1-201ENST00000411597 223 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 PRELID3BP11-201ENST00000414230 479 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 MICG-208ENST00000416822 132 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms