Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC009704.2-201ENST00000618739 483 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC006065.6-201ENST00000625201 545 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC139769.1-204ENST00000472297 1931 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC011155.1-201ENST00000316512 456 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RNA5SP28-201ENST00000363841 119 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC019155.1-201ENST00000382242 574 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 ANAPC10P1-201ENST00000395991 556 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RNA5SP146-201ENST00000410743 123 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 TRGV6-201ENST00000417928 299 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RPL18P10-201ENST00000425606 538 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RPL21P91-201ENST00000429231 479 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 ELOCP11-201ENST00000436690 332 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 MTCO1P53-201ENST00000441633 699 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 ELOCP16-201ENST00000444494 332 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC023512.1-201ENST00000444513 499 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 MTND1P33-201ENST00000446251 917 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 EIF2S2P2-201ENST00000447161 982 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 PSMC1P13-201ENST00000458195 985 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RNU6-1218P-201ENST00000458990 108 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RPS27AP17-201ENST00000463344 455 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC010627.1-201ENST00000503819 1294 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC020699.1-201ENST00000505161 445 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 OR51K1P-201ENST00000510214 950 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC015795.1-201ENST00000513669 327 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AL132857.1-201ENST00000555180 708 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 RN7SL622P-201ENST00000585292 275 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC103792.1-201ENST00000603591 919 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC005191.1-201ENST00000603950 358 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AL157392.4-201ENST00000609756 345 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AC004908.3-201ENST00000610248 625 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 AL035461.2-201ENST00000619201 524 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 NXPH1-205ENST00000602349 1953 ntBASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX9Q9Y5X1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC017007.4-201ENST00000503353 1352 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 SEPT7P7-201ENST00000420492 1301 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MAPK10-303ENST00000641324 3959 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 RNU1-130P-201ENST00000363930 160 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MIR921-201ENST00000401133 56 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC005189.1-201ENST00000431286 310 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MTND2P5-201ENST00000432656 1006 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AL031313.1-201ENST00000448435 256 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 TPT1P3-201ENST00000492841 512 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 HMGB3P13-201ENST00000511263 607 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC108120.2-201ENST00000512973 294 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 EEF1A1P37-201ENST00000522748 715 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms