Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 UBE2V1P11-201ENST00000411559 285 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 HMGB3P31-201ENST00000413333 595 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 EIF2S2P3-201ENST00000428356 999 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RPS7P5-201ENST00000441482 581 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 TRY2P-201ENST00000448860 689 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 CYCSP42-201ENST00000450823 238 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RPL7L1P8-201ENST00000469911 741 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC104689.1-201ENST00000473356 768 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC087385.1-201ENST00000475062 312 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC010374.1-201ENST00000503762 1237 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 BTF3P13-201ENST00000513224 490 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 SNORA76.2-201ENST00000517095 137 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC105129.1-201ENST00000560250 297 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 BGLT3-201ENST00000564523 994 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AP000919.1-202ENST00000581139 1264 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AP001180.3-201ENST00000582221 145 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC079880.2-201ENST00000603790 1213 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC015982.1-201ENST00000608113 465 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AP000864.1-201ENST00000609424 650 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KCNIP3Q9Y2W7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
KCNIP3Q9Y2W7 AC025125.1-201ENST00000624743 1922 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RNU6-543P-201ENST00000362576 108 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RNA5SP391-201ENST00000363456 119 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 MIR621-201ENST00000384919 96 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 HMGB3P18-201ENST00000406327 590 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RNU4-34P-201ENST00000410431 124 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AL158825.1-201ENST00000414735 521 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC073508.1-201ENST00000428866 656 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RPEP2-201ENST00000432149 701 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 PTP4A1P3-201ENST00000433661 420 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC114495.1-201ENST00000441274 436 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC068135.1-201ENST00000446164 246 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 HMGB3P22-202ENST00000451823 572 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 MTND2P30-201ENST00000456663 382 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 COPS8P2-201ENST00000473228 627 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 UBA52P7-201ENST00000486088 380 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RPL23AP73-201ENST00000492507 471 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC090071.1-201ENST00000507713 644 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 ATP1B1P1-201ENST00000509767 915 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC110792.2-201ENST00000510278 224 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RNA5SP73-201ENST00000516744 108 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 MIR3691-201ENST00000578066 90 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms