Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC024560.3-201ENST00000608482 349 ntBASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 AL355073.2-201ENST00000612106 557 ntBASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 AC234782.5-201ENST00000617723 324 ntBASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 AC092650.2-201ENST00000619984 902 ntBASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 VPS35P1-201ENST00000563400 1518 ntBASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNRF3Q9ULT6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ZNRF3Q9ULT6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
ZNRF3Q9ULT6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC126755.2-208ENST00000327792 462 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC138969.1-213ENST00000331436 462 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RNA5SP90-201ENST00000364801 99 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 SUGT1P1-201ENST00000379514 476 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RNU6-225P-201ENST00000384613 103 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 EI24P3-201ENST00000399046 1062 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 HMGB3P7-201ENST00000400214 611 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AL139098.1-201ENST00000407291 389 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RN7SKP114-201ENST00000410327 279 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RN7SKP33-201ENST00000410942 340 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC119751.6-201ENST00000416712 186 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC073069.1-201ENST00000428657 441 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 DNAJC19P7-201ENST00000428811 344 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 UBE2FP3-201ENST00000436366 524 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AL592447.1-201ENST00000447592 540 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC073264.2-201ENST00000448886 166 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RPL23AP71-201ENST00000470966 469 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RPS27P23-201ENST00000487608 251 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC011352.3-201ENST00000505162 593 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 COX6B1P5-201ENST00000509843 249 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 GAPDHP62-201ENST00000515313 990 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC239860.2-201ENST00000525886 270 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC009237.13-201ENST00000603193 276 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC093765.1-201ENST00000603758 881 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC009027.1-201ENST00000604510 479 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 uc_338.9-201ENST00000617424 182 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 U6.42-201ENST00000618440 107 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 MTCO1P23-201ENST00000415223 1526 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 ASNSP1-204ENST00000641977 1664 ntBASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNRF3Q9ULT6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 AL079343.1-201ENST00000572358 1771 ntBASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 OR6C69P-201ENST00000394268 893 ntBASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNRF3Q9ULT6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms