Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 NPM1P47-201ENST00000560843 856 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AL390816.3-201ENST00000604527 1066 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AL591034.3-201ENST00000605511 685 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP97-201ENST00000365006 84 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 HMGN2P8-201ENST00000391458 268 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RPL21P65-201ENST00000406094 466 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 IFNNP1-201ENST00000429219 553 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 HMGB1P16-201ENST00000447155 540 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RPS23P7-201ENST00000466210 444 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC026979.1-201ENST00000492525 396 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 HPRT1P1-201ENST00000509498 657 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RN7SKP122-201ENST00000515923 296 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP143-201ENST00000516936 115 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 OR6R2P-201ENST00000609216 300 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC006338.2-201ENST00000616864 791 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AL645927.2-201ENST00000618350 349 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AL359715.5-201ENST00000623431 443 ntBASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS29Q9UBQ0 AC008725.1-201ENST00000605123 2263 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 LINC00561-201ENST00000565815 2738 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP443-201ENST00000363083 132 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 CYP4F29P-201ENST00000420685 446 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC069277.2-201ENST00000454211 432 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 NDUFA5P9-201ENST00000472609 340 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC108941.1-201ENST00000502853 530 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 SNORD116-26-201ENST00000516006 96 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 NARSP2-201ENST00000518524 679 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 SMARCE1P4-201ENST00000523647 241 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC007424.1-203ENST00000554613 687 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC020914.4-201ENST00000597690 277 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AF230666.2-201ENST00000602328 725 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AL137849.1-201ENST00000604767 169 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 AC073530.2-201ENST00000623987 261 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 CASC19-284ENST00000642142 1868 ntBASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS29Q9UBQ0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms