Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC104687.1-201ENST00000485829 412 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC021146.3-201ENST00000511911 260 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 NPM1P35-201ENST00000533043 868 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 OR8K4P-201ENST00000534608 872 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC027104.1-201ENST00000563702 681 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MTCO2P2-201ENST00000591258 225 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC006116.5-201ENST00000591936 559 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC010857.1-201ENST00000606398 594 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC092653.1-201ENST00000608509 531 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL136164.3-201ENST00000624429 3978 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 OR6C69P-201ENST00000394268 893 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL080315.1-201ENST00000406055 466 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 RN7SKP222-201ENST00000410651 315 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC022022.1-201ENST00000430304 178 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC073587.1-201ENST00000447093 876 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL133244.1-201ENST00000456007 258 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC025164.1-201ENST00000496249 478 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC015795.1-201ENST00000513669 327 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 OR5AK3P-201ENST00000527486 1297 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 LRRC6P1-201ENST00000532188 885 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 PDCD5P1-201ENST00000543528 309 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC025260.1-201ENST00000548858 430 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 ZNF971P-201ENST00000562068 1249 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL020997.2-201ENST00000602607 184 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 AL109659.3-201ENST00000624985 950 ntBASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC6Q9UBN7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 IL6STP1-201ENST00000346911 1020 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 Y_RNA.126-201ENST00000363382 111 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 RNU6-225P-201ENST00000384613 103 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 TCEA1P4-201ENST00000415066 844 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 RPS29P17-201ENST00000430795 166 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 RPL23AP93-201ENST00000440847 484 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 AL592437.1-201ENST00000443781 492 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 NPM1P39-201ENST00000449818 867 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 RPL6P9-201ENST00000466502 859 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 RPS4XP6-201ENST00000477670 797 ntBASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC6Q9UBN7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms