Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHRF1Q9P1Y6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5□□□□□ -1.61
PHRF1Q9P1Y6 AC092435.3-201ENST00000565538 3654 ntBASIC5□□□□□ -1.61
PHRF1Q9P1Y6 MAPK10-303ENST00000641324 3959 ntBASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 AC010740.1-201ENST00000417035 684 ntBASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 ATE1-AS1-202ENST00000636460 506 ntBASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 MFSD8-236ENST00000641509 4050 ntBASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.99□□□□□ -1.61
PHRF1Q9P1Y6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 RNU1-108P-201ENST00000362556 161 ntBASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 RNA5SP50-201ENST00000363731 107 ntBASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 AC096644.3-201ENST00000416788 338 ntBASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 RPL21P10-201ENST00000463521 490 ntBASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 UBE2DNL-203ENST00000474922 222 ntBASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 AC017015.1-201ENST00000477387 286 ntBASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PHRF1Q9P1Y6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC097713.2-201ENST00000430199 356 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AL591363.1-201ENST00000450091 483 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 SNORD105B-201ENST00000458770 79 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 OR6C71P-202ENST00000641886 1107 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 CDY3P-201ENST00000454543 1618 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC010342.1-201ENST00000514047 877 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC090877.1-201ENST00000561418 344 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 MIR4513-201ENST00000581077 86 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AL354976.1-201ENST00000613843 387 ntBASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.97□□□□□ -1.61
PHRF1Q9P1Y6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.96□□□□□ -1.61
PHRF1Q9P1Y6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AC234772.1-201ENST00000377927 937 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 RNA5SP120-201ENST00000410900 112 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 KCTD9P3-201ENST00000434597 1169 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AC006994.1-201ENST00000438212 839 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 RBMY2UP-201ENST00000453474 324 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AC009303.3-201ENST00000591103 736 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AC138627.1-204ENST00000641894 765 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 AL365440.1-201ENST00000436135 2167 ntBASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
PHRF1Q9P1Y6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms