Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL161636.2-201ENST00000445179 927 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 HMGN1P36-201ENST00000446623 298 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 RPL12P39-201ENST00000455456 496 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 VPS26AP1-201ENST00000483197 979 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC091951.2-201ENST00000500762 203 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 GLUD1P3-202ENST00000508551 200 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 RPL7L1P13-201ENST00000511702 739 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC046134.1-201ENST00000514454 666 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 RNU6-1004P-201ENST00000516584 111 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 SNORA20.3-201ENST00000516880 132 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 MRPS16P1-201ENST00000523462 412 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AP002748.2-201ENST00000528671 348 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 PMS2P3-207ENST00000529061 717 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC009101.1-201ENST00000568135 242 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC010547.6-201ENST00000571789 193 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC020914.6-201ENST00000594327 272 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC027243.2-201ENST00000602530 724 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC005084.1-201ENST00000605160 304 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC091304.9-201ENST00000612091 226 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC018816.2-201ENST00000621460 353 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC017104.4-201ENST00000636283 1592 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 MAPK10-328ENST00000641553 4009 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 SNORA64.1-201ENST00000362600 132 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RNA5SP435-201ENST00000364044 108 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RNU6-501P-201ENST00000364072 100 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RN7SKP69-201ENST00000365390 305 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RNA5SP30-201ENST00000365552 115 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 MIR217-201ENST00000384817 110 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AL161909.1-201ENST00000397390 712 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 CIR1P3-201ENST00000405137 479 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 HMGB3P23-201ENST00000414981 585 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 BMS1P17-202ENST00000416720 316 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AL034379.1-201ENST00000423216 253 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC093084.1-201ENST00000424233 687 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 OR10T1P-201ENST00000424327 947 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC233728.2-201ENST00000425348 757 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 GAPDHP48-201ENST00000436626 961 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 OR7E125P-201ENST00000443450 846 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 MTATP6P30-201ENST00000443540 664 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC244505.5-201ENST00000443639 207 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RPL36AP39-201ENST00000445859 318 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 MTCO3P11-201ENST00000455103 774 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 RPS23P6-201ENST00000466136 431 ntBASIC5.02□□□□□ -1.61
PARPBPQ9NWS1 HMGN1P10-201ENST00000474557 553 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms