Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RN7SKP250-201ENST00000363924 321 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC092634.1-201ENST00000366505 199 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 SET-203ENST00000372688 801 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RNU6-1032P-201ENST00000384100 107 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 Y_RNA.574-201ENST00000384766 95 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RPL7P25-201ENST00000404151 721 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RNU4-14P-201ENST00000410858 122 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 ERLEC1P1-201ENST00000433806 578 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RPL3P11-201ENST00000434028 1146 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC092601.1-201ENST00000444526 383 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RN7SL492P-201ENST00000460700 295 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RPS26P11-201ENST00000463445 348 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RN7SL390P-201ENST00000470634 284 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 UOX-201ENST00000471089 899 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RPS26P6-201ENST00000475156 348 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RN7SL568P-201ENST00000493069 298 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 MRPS16P1-201ENST00000523462 412 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 OR5M2P-201ENST00000529003 936 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC093519.1-201ENST00000566109 298 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 MIR3167-201ENST00000579623 85 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC123786.2-201ENST00000603459 275 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL080312.2-201ENST00000613001 630 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL591926.1-201ENST00000620542 217 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC012618.3-205ENST00000637896 1496 ntBASIC6.59□□□□□ -1.36
CUEDC1Q9NWM3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.36
CUEDC1Q9NWM3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.36
CUEDC1Q9NWM3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
CUEDC1Q9NWM3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.59□□□□□ -1.36
CUEDC1Q9NWM3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
CUEDC1Q9NWM3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AL512646.1-201ENST00000269395 1077 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 Y_RNA.301-201ENST00000364990 103 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MIR548M-201ENST00000408260 86 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC008267.5-201ENST00000424928 265 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC079807.1-201ENST00000429993 481 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 RPL7P59-201ENST00000447700 943 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 RPL23AP28-201ENST00000448062 470 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC099670.1-201ENST00000455141 783 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AL356010.1-201ENST00000456364 102 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 RPS4XP10-201ENST00000465034 731 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 RPS27P23-201ENST00000487608 251 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms