Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC093392.1-201ENST00000366280 340 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AL161787.1-201ENST00000401543 174 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RPL21P67-201ENST00000402896 478 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 NDUFS5P1-201ENST00000405668 289 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 ACTR3BP6-201ENST00000422332 1241 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC018630.2-202ENST00000422992 927 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AL353729.1-201ENST00000425044 720 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC024082.2-201ENST00000434771 238 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 PHB2P1-201ENST00000434943 890 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 OR3D1P-201ENST00000438288 955 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 OR7H1P-201ENST00000448965 922 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 FABP5P13-201ENST00000452144 328 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC083904.1-201ENST00000487828 231 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 HSD3BP4-201ENST00000511509 1120 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RNU6-189P-201ENST00000516120 101 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RNU6-559P-201ENST00000516151 98 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RNU4-60P-201ENST00000517239 135 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 MTND6P20-201ENST00000522986 418 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC104117.2-201ENST00000523735 515 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC092747.3-201ENST00000603769 301 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AC104763.2-201ENST00000604179 382 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RN7SL113P-201ENST00000619959 299 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 MAPK10-344ENST00000641718 3746 ntBASIC8.57□□□□□ -1.04
RTN4Q9NQC3 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 DDX11L16-201ENST00000507418 1306 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC139769.1-204ENST00000472297 1931 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 RACGAP1P-201ENST00000550663 1879 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC025031.4-201ENST00000621248 3271 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 SNORA7B-201ENST00000384360 139 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC074085.1-201ENST00000413598 418 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 RPS23P10-201ENST00000416185 486 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC004129.1-201ENST00000417617 796 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC111200.2-201ENST00000418877 505 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 OR51R1P-201ENST00000435309 952 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC090774.1-201ENST00000435925 246 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 RPL19P13-201ENST00000483119 583 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 HIGD1AP13-201ENST00000509878 289 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 BTF3P13-201ENST00000513224 490 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AP003080.1-202ENST00000526526 915 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC233290.2-201ENST00000552852 390 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 OR11H5P-201ENST00000554039 926 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms